RNA–Protein interactions for RNA: ENST00000586499.5

TPM4-204, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-204ENST00000586499 TTC13Q8NBP0 860 aa18.82■□□□□ 0.6
TPM4-204ENST00000586499 WDR36Q8NI36 951 aaKnown RBP18.82■□□□□ 0.6
TPM4-204ENST00000586499 SNIP1Q8TAD8 396 aaKnown RBP18.82■□□□□ 0.6
TPM4-204ENST00000586499 SLC35B2Q8TB61 432 aa18.82■□□□□ 0.6
TPM4-204ENST00000586499 ATG4AQ8WYN0 398 aa18.82■□□□□ 0.6
TPM4-204ENST00000586499 NAF1Q96HR8 494 aaKnown RBP18.82■□□□□ 0.6
TPM4-204ENST00000586499 LZTFL1Q9NQ48 299 aa18.82■□□□□ 0.6
TPM4-204ENST00000586499 LHX6Q9UPM6 363 aa18.82■□□□□ 0.6
TPM4-204ENST00000586499 AAR2Q9Y312 384 aaKnown RBP18.82■□□□□ 0.6
TPM4-204ENST00000586499 KCTD3Q9Y597 815 aa18.82■□□□□ 0.6
TPM4-204ENST00000586499 CCDC187A0A096LP49 1063 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 C5orf60A6NFR6 353 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 CHUKO15111 745 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 DXOO77932 396 aaKnown RBP18.81■□□□□ 0.6
TPM4-204ENST00000586499 METTL18O95568 372 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 HGFP14210 728 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 CD1CP29017 333 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 SPAM1P38567 509 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 CCDC173Q0VFZ6 552 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 NR1D2Q14995 579 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 NKAIN2Q5VXU1 208 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 ZNF547Q8IVP9 402 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 SFRP1Q8N474 314 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 TAB3Q8N5C8 712 aaPredicted RBP18.81■□□□□ 0.6
TPM4-204ENST00000586499 CCDC112Q8NEF3 446 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 GDAP1Q8TB36 358 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 SLC46A1Q96NT5 459 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 VPS35Q96QK1 796 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 TMEM121Q9BTD3 319 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 SEMA6CQ9H3T2 930 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 PRDM8Q9NQV8 689 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 KLC4Q9NSK0 619 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 PKP3Q9Y446 797 aa18.81■□□□□ 0.6
TPM4-204ENST00000586499 A6NCN8 305 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 GAPDHSO14556 408 aaPredicted RBP18.8■□□□□ 0.6
TPM4-204ENST00000586499 STX7O15400 261 aaKnown RBP18.8■□□□□ 0.6
TPM4-204ENST00000586499 CDK14O94921 469 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 TNFSF15O95150 251 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 RBMS1P29558 406 aaKnown RBP18.8■□□□□ 0.6
TPM4-204ENST00000586499 CCKBRP32239 447 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 CCZ1BP86790 482 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 CCZ1P86791 482 aaPredicted RBP18.8■□□□□ 0.6
TPM4-204ENST00000586499 ZFP36L1Q07352 338 aaKnown RBP18.8■□□□□ 0.6
TPM4-204ENST00000586499 TMEM115Q12893 351 aaPredicted RBP18.8■□□□□ 0.6
TPM4-204ENST00000586499 MSLNQ13421 630 aaPredicted RBP18.8■□□□□ 0.6
TPM4-204ENST00000586499 DENND5AQ6IQ26 1287 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 IYDQ6PHW0 289 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 ZNF574Q6ZN55 896 aaPredicted RBP18.8■□□□□ 0.6
TPM4-204ENST00000586499 ARHGEF18Q6ZSZ5 1173 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 RAB11FIP2Q7L804 512 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 LIN37Q96GY3 246 aaPredicted RBP18.8■□□□□ 0.6
TPM4-204ENST00000586499 ZNF578Q96N58 590 aaPredicted RBP18.8■□□□□ 0.6
TPM4-204ENST00000586499 TMEM74Q96NL1 305 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 TBL1YQ9BQ87 522 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 NUDT22Q9BRQ3 303 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 DNAJC16Q9Y2G8 782 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 PCDHGA8Q9Y5G5 932 aa18.8■□□□□ 0.6
TPM4-204ENST00000586499 GLYATL1P3A0A0U1RQE8 302 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 VEGFDO43915 354 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 CPNE6O95741 557 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 HOXB3P14651 431 aaPredicted RBP18.79■□□□□ 0.6
TPM4-204ENST00000586499 GPR3P46089 330 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 PARP6Q2NL67 630 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 MAP9Q49MG5 647 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 MEI1Q5TIA1 1274 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 PIM3Q86V86 326 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 SLITRK4Q8IW52 837 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 FBXO39Q8N4B4 442 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 OR4K2Q8NGD2 314 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 STRADBQ9C0K7 418 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 OSGEPL1Q9H4B0 414 aa18.79■□□□□ 0.6
TPM4-204ENST00000586499 IGHV1OR21-1A0A087WYE8 117 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 GPR89AB7ZAQ6 455 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 PLD2O14939 933 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 KMOO15229 486 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 RRP8O43159 456 aaKnown RBP18.78■□□□□ 0.6
TPM4-204ENST00000586499 CCDC175P0C221 793 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 GPR89BP0CG08 455 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 F3P13726 295 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 ZNF7P17097 686 aaPredicted RBP18.78■□□□□ 0.6
TPM4-204ENST00000586499 LPOP22079 712 aaPredicted RBP18.78■□□□□ 0.6
TPM4-204ENST00000586499 MPSTP25325 297 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 FASLGP48023 281 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 ERVPABLB-1P60509 514 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 CFHR1Q03591 330 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 NFATC2Q13469 925 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 RPS6KA1Q15418 735 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 TAF1AQ15573 450 aaPredicted RBP18.78■□□□□ 0.6
TPM4-204ENST00000586499 INSCQ1MX18 579 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.78■□□□□ 0.6
TPM4-204ENST00000586499 PHF19Q5T6S3 580 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 SEL1L2Q5TEA6 688 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 ZDHHC20Q5W0Z9 365 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 KCTD11Q693B1 232 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 LRRC69Q6ZNQ3 347 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 MICALCLQ6ZW33 695 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 LRRTM4Q86VH4 590 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 SLC13A5Q86YT5 568 aaPredicted RBP18.78■□□□□ 0.6
TPM4-204ENST00000586499 KLHDC8BQ8IXV7 354 aa18.78■□□□□ 0.6
TPM4-204ENST00000586499 OR13C4Q8NGS5 318 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms