RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 NTRK1P04629 796 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 MAP4P27816 1152 aaKnown RBP11.21□□□□□ -0.61
TOP3A-217ENST00000584582 SERPINA4P29622 427 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 RAP1GDS1P52306 607 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 DEFB103AP81534 67 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 STARD3Q14849 445 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 SLC30A9Q6PML9 568 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 CYB5D2Q8WUJ1 264 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 CASD1Q96PB1 797 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 ACAT2Q9BWD1 397 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 MARCH5Q9NX47 278 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 WARS2Q9UGM6 360 aaKnown RBP11.21□□□□□ -0.61
TOP3A-217ENST00000584582 SLCO3A1Q9UIG8 710 aa11.21□□□□□ -0.61
TOP3A-217ENST00000584582 TET1Q8NFU7 2136 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 RAD51BO15315 384 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 RFPL2O75678 378 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 CLIC3O95833 236 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 IGSF6O95976 241 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 MTPNP58546 118 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 HERVK_113P63132 956 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 SAMD4BQ5PRF9 694 aaKnown RBP11.21□□□□□ -0.62
TOP3A-217ENST00000584582 Q6ZVU0 165 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 SLC44A2Q8IWA5 706 aaPredicted RBP11.21□□□□□ -0.62
TOP3A-217ENST00000584582 PGAM4Q8N0Y7 254 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 LSMEM2Q8N112 164 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 NKAPQ8N5F7 415 aaKnown RBP11.21□□□□□ -0.62
TOP3A-217ENST00000584582 HJURPQ8NCD3 748 aaPredicted RBP11.21□□□□□ -0.62
TOP3A-217ENST00000584582 MDGA1Q8NFP4 955 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 CANT1Q8WVQ1 401 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 CDK5RAP1Q96SZ6 601 aaKnown RBP11.21□□□□□ -0.62
TOP3A-217ENST00000584582 ERVK-6Q9BXR3 956 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 PARVBQ9HBI1 364 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 HPS4Q9NQG7 708 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 VPS9D1Q9Y2B5 631 aa11.21□□□□□ -0.62
TOP3A-217ENST00000584582 FKBP9O95302 570 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 TM4SF4P48230 202 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 NEK2P51955 445 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 CASP9P55211 416 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 SLC44A4Q53GD3 710 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 UNC50Q53HI1 259 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 UGT3A1Q6NUS8 523 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 DOK6Q6PKX4 331 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 TMEM207Q6UWW9 146 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 GCNT7Q6ZNI0 430 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 FKBP9P1Q75LS8 142 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 PNPT1Q8TCS8 783 aaKnown RBP11.2□□□□□ -0.62
TOP3A-217ENST00000584582 FAM162AQ96A26 154 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 SLC39A13Q96H72 371 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 PAWRQ96IZ0 340 aaKnown RBP11.2□□□□□ -0.62
TOP3A-217ENST00000584582 CCDC138Q96M89 665 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 AARSD1Q9BTE6 412 aaKnown RBP11.2□□□□□ -0.62
TOP3A-217ENST00000584582 PSMD13Q9UNM6 376 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 WDR81Q562E7 1941 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 LEPRP48357 1165 aaKnown RBP11.2□□□□□ -0.62
TOP3A-217ENST00000584582 UFM1P61960 85 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 LCP2Q13094 533 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 MAP7Q14244 749 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 ZNF678Q5SXM1 525 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 ZNF648Q5T619 568 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-217ENST00000584582 C11orf96Q7Z7L8 435 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 TSPAN33Q86UF1 283 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 SLAIN1Q8ND83 568 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 PSKH2Q96QS6 385 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 SLC30A3Q99726 388 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 DPY30Q9C005 99 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 TRIM15Q9C019 465 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 ATP13A3Q9H7F0 1226 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 TREX1Q9NSU2 369 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 LIMD1Q9UGP4 676 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 LRRC42Q9Y546 428 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 DNAJC15Q9Y5T4 150 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 PSME4Q14997 1843 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 TRIM24O15164 1050 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 PRAMEF12O95522 483 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 ZNF682O95780 498 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 WASP42768 502 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 PLCL1Q15111 1095 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 CHRNA6Q15825 494 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 LRRC23Q53EV4 343 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-217ENST00000584582 TTC33Q6PID6 262 aaPredicted RBP11.2□□□□□ -0.62
TOP3A-217ENST00000584582 ADCK2Q7Z695 626 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 ITIH5Q86UX2 942 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 STK32CQ86UX6 486 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 SELENOMQ8WWX9 145 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 LRCH3Q96II8 777 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 ASAH2Q9NR71 780 aa11.2□□□□□ -0.62
TOP3A-217ENST00000584582 PAPOLBQ9NRJ5 636 aaKnown RBP11.2□□□□□ -0.62
TOP3A-217ENST00000584582 C15orf38-AP3S2A0A0A6YYH1 394 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 GLYATL1P3A0A0U1RQE8 302 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 TEX28O15482 410 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 NPHS1O60500 1241 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 RNASEH1O60930 286 aaKnown RBP11.19□□□□□ -0.62
TOP3A-217ENST00000584582 SYN1P17600 705 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 ADRA1AP35348 466 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 CPOXP36551 454 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 CCNHP51946 323 aaPredicted RBP11.19□□□□□ -0.62
TOP3A-217ENST00000584582 ST8SIA6P61647 398 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 TTLL9Q3SXZ7 439 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 ZNF549Q6P9A3 640 aa11.19□□□□□ -0.62
TOP3A-217ENST00000584582 ARPINQ7Z6K5 226 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms