RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 MAZP56270 477 aaKnown RBP9.78□□□□□ -0.84
SKA2-208ENST00000583927 PCBP4P57723 403 aaKnown RBP9.78□□□□□ -0.84
SKA2-208ENST00000583927 TRA2AQ13595 282 aaKnown RBP eCLIP9.78□□□□□ -0.84
SKA2-208ENST00000583927 ITGA9Q13797 1035 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 PRPSAP1Q14558 356 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 KIR2DS5Q14953 304 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 TCEA2Q15560 299 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 TAF1AQ15573 450 aaPredicted RBP9.78□□□□□ -0.84
SKA2-208ENST00000583927 ATP13A5Q4VNC0 1218 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.78□□□□□ -0.84
SKA2-208ENST00000583927 FAM182AQ5T1J6 154 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 KCTD11Q693B1 232 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 AADACL2Q6P093 401 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 IYDQ6PHW0 289 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 WASH2PQ6VEQ5 465 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 GLT6D1Q7Z4J2 308 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 ADGRG6Q86SQ4 1221 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 PIM3Q86V86 326 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 SLITRK4Q8IW52 837 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 SFTPA2Q8IWL1 248 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 ZNF248Q8NDW4 579 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 IPMKQ8NFU5 416 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 LRRC45Q96CN5 670 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 DPH1Q9BZG8 443 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 UCK1Q9HA47 277 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 WASH6PQ9NQA3 447 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 PDP2Q9P2J9 529 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 TMPRSS11EQ9UL52 423 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 PACSIN2Q9UNF0 486 aaPredicted RBP9.78□□□□□ -0.84
SKA2-208ENST00000583927 SATB2Q9UPW6 733 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 PKP3Q9Y446 797 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 PCDHGA7Q9Y5G6 932 aa9.78□□□□□ -0.84
SKA2-208ENST00000583927 PCYT1BQ9Y5K3 369 aaPredicted RBP9.78□□□□□ -0.84
SKA2-208ENST00000583927 DNMT3AQ9Y6K1 912 aaPredicted RBP9.78□□□□□ -0.84
SKA2-208ENST00000583927 IGHV1OR21-1A0A087WYE8 117 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 KLHL33A6NCF5 533 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 C2orf81A6NN90 581 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 GAPDHSO14556 408 aaPredicted RBP9.77□□□□□ -0.85
SKA2-208ENST00000583927 PLD2O14939 933 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 HGSO14964 777 aaPredicted RBP9.77□□□□□ -0.85
SKA2-208ENST00000583927 CASC3O15234 703 aaKnown RBP9.77□□□□□ -0.85
SKA2-208ENST00000583927 PPM1DO15297 605 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 CDK14O94921 469 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 XRCC1P18887 633 aaPredicted RBP9.77□□□□□ -0.85
SKA2-208ENST00000583927 LPOP22079 712 aaPredicted RBP9.77□□□□□ -0.85
SKA2-208ENST00000583927 PSMB4P28070 264 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 RBMS1P29558 406 aaKnown RBP9.77□□□□□ -0.85
SKA2-208ENST00000583927 DMPKQ09013 629 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 TMEM115Q12893 351 aaPredicted RBP9.77□□□□□ -0.85
SKA2-208ENST00000583927 OASLQ15646 514 aaKnown RBP9.77□□□□□ -0.85
SKA2-208ENST00000583927 PARP6Q2NL67 630 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 P3H1Q32P28 736 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 C3orf38Q5JPI3 329 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 LDLRAP1Q5SW96 308 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 MEI1Q5TIA1 1274 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 ALS2CLQ60I27 953 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 DENND5AQ6IQ26 1287 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 LRRC69Q6ZNQ3 347 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 MARK2Q7KZI7 788 aaKnown RBP9.77□□□□□ -0.85
SKA2-208ENST00000583927 RAB11FIP2Q7L804 512 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 CHST15Q7LFX5 561 aaPredicted RBP9.77□□□□□ -0.85
SKA2-208ENST00000583927 B3GNT8Q7Z7M8 397 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 LRRTM4Q86VH4 590 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 LRRC8AQ8IWT6 810 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 SLC25A41Q8N5S1 370 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 DDHD1Q8NEL9 900 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 OR4D9Q8NGE8 314 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 CCDC110Q8TBZ0 833 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 BLOC1S5Q8TDH9 187 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 SLC37A2Q8TED4 501 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 PATE1Q8WXA2 126 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 SH3KBP1Q96B97 665 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 CCDC97Q96F63 343 aaPredicted RBP9.77□□□□□ -0.85
SKA2-208ENST00000583927 ZCCHC2Q9C0B9 1178 aaKnown RBP9.77□□□□□ -0.85
SKA2-208ENST00000583927 OR2AG1Q9H205 316 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 EPB41L1Q9H4G0 881 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 C10orf88Q9H8K7 445 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 TBC1D29Q9UFV1 150 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 GUCA1BQ9UMX6 200 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 PLEKHM1Q9Y4G2 1056 aa9.77□□□□□ -0.85
SKA2-208ENST00000583927 GLYATL1P3A0A0U1RQE8 302 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 ERI2A8K979 691 aaKnown RBP9.76□□□□□ -0.85
SKA2-208ENST00000583927 H7C0S8 307 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 NVLO15381 856 aaKnown RBP9.76□□□□□ -0.85
SKA2-208ENST00000583927 STX7O15400 261 aaKnown RBP9.76□□□□□ -0.85
SKA2-208ENST00000583927 PSMD3O43242 534 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 CRTAMO95727 393 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 AGTP01019 485 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 CCDC175P0C221 793 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 ZNF7P17097 686 aaPredicted RBP9.76□□□□□ -0.85
SKA2-208ENST00000583927 PSMA3P25788 255 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 CD1CP29017 333 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 HADHAP40939 763 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 ABCG1P45844 678 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 LIMK2P53671 638 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 EPHA4P54764 986 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 OR1D5P58170 312 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 HHEXQ03014 270 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 SEL1L2Q5TEA6 688 aa9.76□□□□□ -0.85
SKA2-208ENST00000583927 AGAP9Q5VTM2 703 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms