RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 DSG4Q86SJ6 1040 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 TTC7BQ86TV6 843 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 ADIPOR2Q86V24 386 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 SERPINA9Q86WD7 417 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 C10orf67Q8IYJ2 551 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 CENPLQ8N0S6 344 aaPredicted RBP9.22□□□□□ -0.93
SS18-220ENST00000582092 FITM2Q8N6M3 262 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 STAG3L4Q8TBR4 150 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 OR8D1Q8WZ84 308 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 LPGAT1Q92604 370 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 EXT2Q93063 718 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 FAM136AQ96C01 138 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 KLHL29Q96CT2 875 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 SCRN2Q96FV2 425 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 LMLNQ96KR4 655 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 RMDN2Q96LZ7 410 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 NSMCE3Q96MG7 304 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 GATA5Q9BWX5 397 aaPredicted RBP9.22□□□□□ -0.93
SS18-220ENST00000582092 UNKQ9C0B0 810 aaKnown RBP9.22□□□□□ -0.93
SS18-220ENST00000582092 DRC3Q9H069 523 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 MYLK2Q9H1R3 596 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 ALG9Q9H6U8 611 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 SAR1AQ9NR31 198 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 IGSF5Q9NSI5 407 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.22□□□□□ -0.93
SS18-220ENST00000582092 ELOVL2Q9NXB9 296 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 GTSE1Q9NYZ3 720 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 SUN2Q9UH99 717 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 TRIM33Q9UPN9 1127 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 RAP2CQ9Y3L5 183 aa9.22□□□□□ -0.93
SS18-220ENST00000582092 ANKRD36A6QL64 1941 aa9.21□□□□□ -0.93
SS18-220ENST00000582092 GOLGA8QA0A0J9YX86 632 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 EDDM13A0A1B0GTR0 161 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 CCDC189A1A4V9 331 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 GOLGA8OA6NCC3 632 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 TRPC5OSA6NMA1 111 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 SUPT3HB4E1H0 165 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 WASH3PC4AMC7 463 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 SPECC1L-ADORA2AF8WAN1 911 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 GOLGA8NF8WBI6 632 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 DLX3O60479 287 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 TULP3O75386 442 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 SUPT3HO75486 399 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 DNAJC8O75937 253 aaPredicted RBP9.21□□□□□ -0.94
SS18-220ENST00000582092 IPO13O94829 963 aaKnown RBP9.21□□□□□ -0.94
SS18-220ENST00000582092 FSBPO95073 299 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 ESRRAP11474 423 aaPredicted RBP9.21□□□□□ -0.94
SS18-220ENST00000582092 ARSAP15289 507 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 NCF2P19878 526 aaPredicted RBP9.21□□□□□ -0.94
SS18-220ENST00000582092 CD72P21854 359 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 DGKAP23743 735 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 TARSP26639 723 aaKnown RBP9.21□□□□□ -0.94
SS18-220ENST00000582092 SERPINB3P29508 390 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 VIPR1P32241 457 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 GMPRP36959 345 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 MXRA7P84157 204 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 KDSRQ06136 332 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 SEMA3AQ14563 771 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 EIF4HQ15056 248 aaKnown RBP9.21□□□□□ -0.94
SS18-220ENST00000582092 GEN1Q17RS7 908 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 TTLL9Q3SXZ7 439 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 TECRLQ5HYJ1 363 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 SEL1L3Q68CR1 1132 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 LRRC66Q68CR7 880 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 NXNQ6DKJ4 435 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 PSAPL1Q6NUJ1 521 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 PAQR3Q6TCH7 311 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 CRTC1Q6UUV9 634 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 FRA10AC1Q70Z53 315 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 KIAA0907Q7Z7F0 614 aaPredicted RBP9.21□□□□□ -0.94
SS18-220ENST00000582092 ALYREFQ86V81 257 aaKnown RBP9.21□□□□□ -0.94
SS18-220ENST00000582092 SYNPOQ8N3V7 929 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 HCAR2Q8TDS4 363 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 INPP5DQ92835 1189 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 CLDN23Q96B33 292 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 PHF21BQ96EK2 531 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 PPP1R16AQ96I34 528 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 NSL1Q96IY1 281 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 UBXN10Q96LJ8 280 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 SMIM14Q96QK8 99 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 PANX3Q96QZ0 392 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 GPR21Q99679 349 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 SPATA16Q9BXB7 569 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 FAM126AQ9BYI3 521 aaPredicted RBP9.21□□□□□ -0.94
SS18-220ENST00000582092 CDH19Q9H159 772 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 TFB2MQ9H5Q4 396 aaKnown RBP9.21□□□□□ -0.94
SS18-220ENST00000582092 LMAN1LQ9HAT1 526 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 CYP4F12Q9HCS2 524 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 PFDN4Q9NQP4 134 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 PNPOQ9NVS9 261 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 DNAJC28Q9NX36 388 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 FBXO10Q9UK96 956 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 FBXO4Q9UKT5 387 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 SLC27A6Q9Y2P4 619 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 MYLKQ15746 1914 aa9.21□□□□□ -0.94
SS18-220ENST00000582092 COL4A2P08572 1712 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 UPK3BL1B0FP48 263 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 UPK3BL2E5RIL1 263 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 ARNTLO00327 626 aa9.2□□□□□ -0.94
SS18-220ENST00000582092 KPNA3O00505 521 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms