RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 ARHGEF2Q92974 986 aaKnown RBP4.38□□□□□ -1.71
NF1-220ENST00000581113 ZKSCAN4Q969J2 545 aaPredicted RBP4.38□□□□□ -1.71
NF1-220ENST00000581113 ORAI1Q96D31 301 aa4.38□□□□□ -1.71
NF1-220ENST00000581113 GRAMD2BQ96HH9 432 aa4.38□□□□□ -1.71
NF1-220ENST00000581113 FAM84BQ96KN1 310 aaPredicted RBP4.38□□□□□ -1.71
NF1-220ENST00000581113 PPP1R13BQ96KQ4 1090 aa4.38□□□□□ -1.71
NF1-220ENST00000581113 ZNF385AQ96PM9 386 aaKnown RBP4.38□□□□□ -1.71
NF1-220ENST00000581113 CTAGE1Q96RT6 745 aa4.38□□□□□ -1.71
NF1-220ENST00000581113 CMKLR1Q99788 373 aa4.38□□□□□ -1.71
NF1-220ENST00000581113 WDR26Q9H7D7 661 aa4.38□□□□□ -1.71
NF1-220ENST00000581113 WWOXQ9NZC7 414 aa4.38□□□□□ -1.71
NF1-220ENST00000581113 CORO1CQ9ULV4 474 aaPredicted RBP4.38□□□□□ -1.71
NF1-220ENST00000581113 PROCRQ9UNN8 238 aa4.38□□□□□ -1.71
NF1-220ENST00000581113 PIK3C2BO00750 1634 aa4.38□□□□□ -1.71
NF1-220ENST00000581113 ADGRB3O60242 1522 aa4.38□□□□□ -1.71
NF1-220ENST00000581113 ALKQ9UM73 1620 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 CFAP65Q6ZU64 1925 aaKnown RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 SAA2-SAA4A0A096LPE2 208 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 A0A1W2PRQ8 180 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 BICDL2A1A5D9 508 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 DENND3A2RUS2 1198 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 PI4KAP2A4QPH2 592 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 MAGEA13PA6NCF6 341 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 LIPT2A6NK58 231 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 SMTNL1A8MU46 457 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 CLGNO14967 610 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 NDUFS3O75489 264 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 LINC00271P0C7V0 271 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 LAMP2P13473 410 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 PPARGP37231 505 aaPredicted RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 PIK3CAP42336 1068 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 DCAF7P61962 342 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 CSNK2A1P68400 391 aaPredicted RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 NUCB1Q02818 461 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 FOXM1Q08050 763 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 MAMLD1Q13495 774 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 KCNT1Q5JUK3 1230 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 FAM122CQ6P4D5 195 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 SPSB3Q6PJ21 355 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 C1orf122Q6ZSJ8 110 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 IKBIPQ70UQ0 350 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 CHERPQ8IWX8 916 aaKnown RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 CSNK2A3Q8NEV1 391 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 BICD1Q96G01 975 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 TMEM19Q96HH6 336 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 DUX5Q96PT3 197 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 SERINC2Q96SA4 455 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 SPRY4Q9C004 299 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 MUC13Q9H3R2 512 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 RETREG1Q9H6L5 497 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 SEBOXQ9HB31 216 aaPredicted RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 VDAC3Q9Y277 283 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 LOXL2Q9Y4K0 774 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 KDM5AP29375 1690 aaKnown RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 NUP155O75694 1391 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 A0A0G2JPF8 293 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 HNRNPCL2B2RXH8 293 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 HNRNPCL3B7ZW38 293 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 F5H0A9 414 aaPredicted RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 DDX58O95786 925 aaKnown RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 SCGB1D1O95968 90 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 HNRNPCL4P0DMR1 293 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 TMPOP42166 694 aaKnown RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 NLRP5P59047 1200 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 BRWD1-AS2P59051 145 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 NIPAL4Q0D2K0 466 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 CASC1Q6TDU7 716 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 KRT77Q7Z794 578 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 ODF3L1Q8IXM7 274 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 PCDH20Q8N6Y1 951 aaKnown RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 SPATA22Q8NHS9 363 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 MAGEC3Q8TD91 643 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 DUSP19Q8WTR2 217 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 ITPAQ9BY32 194 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 CHMP4BQ9H444 224 aaKnown RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 DDX31Q9H8H2 851 aaKnown RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 CWC25Q9NXE8 425 aaPredicted RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 MCM9Q9NXL9 1143 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 R3HDM2Q9Y2K5 976 aaKnown RBP4.37□□□□□ -1.71
NF1-220ENST00000581113 LRP12Q9Y561 859 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 STRCP1A6NGW2 1772 aa4.37□□□□□ -1.71
NF1-220ENST00000581113 TET3O43151 1660 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 ZFYVE9O95405 1425 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 RIMS2Q9UQ26 1411 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 TMEM94Q12767 1356 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 PLEKHG1Q9ULL1 1385 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 UNC13BO14795 1591 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 GOLGA6L9A6NEM1 432 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 H3BQ06 376 aaPredicted RBP4.36□□□□□ -1.71
NF1-220ENST00000581113 SLC16A5O15375 505 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 SPINT2O43291 252 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 JRKO75564 520 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 IGHDP01880 384 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 FAM200BP0CF97 657 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 ACADMP11310 421 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 RARGP13631 454 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 CAPN3P20807 821 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 HOXC9P31274 260 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 GAS1P54826 345 aa4.36□□□□□ -1.71
NF1-220ENST00000581113 EIF4A2Q14240 407 aaKnown RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms