RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 MANSC1Q9H8J5 431 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 TRMT6Q9UJA5 497 aaKnown RBP18.39■□□□□ 0.53
PRKCA-203ENST00000578063 SCML1Q9UN30 329 aa18.39■□□□□ 0.53
PRKCA-203ENST00000578063 KLF11O14901 512 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 LZTS3O60299 673 aaPredicted RBP18.38■□□□□ 0.53
PRKCA-203ENST00000578063 DNAJC6O75061 913 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 NIPSNAP2O75323 286 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 DNTTP04053 509 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 ZBTB16Q05516 673 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 GPRC6AQ5T6X5 926 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 TMEM207Q6UWW9 146 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 LRRC34Q8IZ02 419 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 MAFAQ8NHW3 353 aaPredicted RBP18.38■□□□□ 0.53
PRKCA-203ENST00000578063 RPLP0P6Q8NHW5 317 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 NUS1Q96E22 293 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 VPS35Q96QK1 796 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 CCT8L2Q96SF2 557 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 MRPL57Q9BQC6 102 aaKnown RBP18.38■□□□□ 0.53
PRKCA-203ENST00000578063 MKRN2Q9H000 416 aaKnown RBP18.38■□□□□ 0.53
PRKCA-203ENST00000578063 MRPL46Q9H2W6 279 aaKnown RBP18.38■□□□□ 0.53
PRKCA-203ENST00000578063 KCTD5Q9NXV2 234 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 PLXNA2O75051 1894 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 UNC80Q8N2C7 3258 aa18.38■□□□□ 0.53
PRKCA-203ENST00000578063 A0A1W2PP55 124 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 CFAP99D6REC4 459 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 MMP20O60882 483 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 RECQL5O94762 991 aaPredicted RBP18.37■□□□□ 0.53
PRKCA-203ENST00000578063 C7P10643 843 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 CPA3P15088 417 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 CHRM3P20309 590 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 COL9A1P20849 921 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 GLRBP48167 497 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 PCLAFQ15004 111 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 ACAP2Q15057 778 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.37■□□□□ 0.53
PRKCA-203ENST00000578063 CPLX4Q7Z7G2 160 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 TMPRSS6Q8IU80 811 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 ADHFE1Q8IWW8 467 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 FSTL5Q8N475 847 aaPredicted RBP18.37■□□□□ 0.53
PRKCA-203ENST00000578063 DDHD1Q8NEL9 900 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 ANKRD49Q8WVL7 239 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 SREK1Q8WXA9 508 aaKnown RBP18.37■□□□□ 0.53
PRKCA-203ENST00000578063 FAM131CQ96AQ9 280 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 MECRQ9BV79 373 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 CD248Q9HCU0 757 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 XPR1Q9UBH6 696 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 NDUFAB1O14561 156 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 RNASEH2AO75792 299 aaKnown RBP18.37■□□□□ 0.53
PRKCA-203ENST00000578063 RBP1P09455 135 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 BGNP21810 368 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 DRD4P21917 467 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 PRKCQQ04759 706 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 TTC31Q49AM3 519 aaPredicted RBP18.37■□□□□ 0.53
PRKCA-203ENST00000578063 SETMARQ53H47 684 aaPredicted RBP18.37■□□□□ 0.53
PRKCA-203ENST00000578063 ATG16L1Q676U5 607 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 ZNF852Q6ZMS4 543 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 NLRP8Q86W28 1048 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 NKAPQ8N5F7 415 aaKnown RBP18.37■□□□□ 0.53
PRKCA-203ENST00000578063 CD200R1Q8TD46 325 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 FAM136AQ96C01 138 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 DCUN1D1Q96GG9 259 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 FAM107BQ9H098 131 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 TMPRSS11EQ9UL52 423 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 MMP17Q9ULZ9 603 aa18.37■□□□□ 0.53
PRKCA-203ENST00000578063 FADS2P1A8MWK0 482 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 TK2O00142 265 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 MYL2P10916 166 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 RALBP11234 206 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 ALDH3A1P30838 453 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 AKT1P31749 480 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 CLCN7P51798 805 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 TAS2R38P59533 333 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 DPTQ07507 201 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 SFSWAPQ12872 951 aaKnown RBP18.36■□□□□ 0.53
PRKCA-203ENST00000578063 TECRLQ5HYJ1 363 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 LDLRAP1Q5SW96 308 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 PAQR3Q6TCH7 311 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 ZYG11AQ6WRX3 759 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 SPATA6LQ8N4H0 392 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 BTN2A2Q8WVV5 523 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 GLYATL1Q969I3 302 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 CCDC97Q96F63 343 aaPredicted RBP18.36■□□□□ 0.53
PRKCA-203ENST00000578063 DERL2Q9GZP9 239 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 RABEP2Q9H5N1 569 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 PRDM6Q9NQX0 595 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 FBXL12Q9NXK8 326 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 SERGEFQ9UGK8 458 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 SORCS3Q9UPU3 1222 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 COQ6Q9Y2Z9 468 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 PRSS21Q9Y6M0 314 aa18.36■□□□□ 0.53
PRKCA-203ENST00000578063 F8W8V4 182 aa18.35■□□□□ 0.53
PRKCA-203ENST00000578063 G3V2L1 256 aa18.35■□□□□ 0.53
PRKCA-203ENST00000578063 OR56A5P0C7T3 313 aa18.35■□□□□ 0.53
PRKCA-203ENST00000578063 CD1DP15813 335 aa18.35■□□□□ 0.53
PRKCA-203ENST00000578063 KCNA4P22459 653 aa18.35■□□□□ 0.53
PRKCA-203ENST00000578063 ATP6V0D1P61421 351 aa18.35■□□□□ 0.53
PRKCA-203ENST00000578063 B4GALNT1Q00973 533 aa18.35■□□□□ 0.53
PRKCA-203ENST00000578063 CHI3L2Q15782 390 aa18.35■□□□□ 0.53
PRKCA-203ENST00000578063 TMEM151AQ8N4L1 468 aa18.35■□□□□ 0.53
PRKCA-203ENST00000578063 CLDN19Q8N6F1 224 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms