RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 UGT1A5P35504 534 aa15.07■□□□□ 0
SMG6-220ENST00000576218 HADHAP40939 763 aa15.07■□□□□ 0
SMG6-220ENST00000576218 GABREP78334 506 aa15.07■□□□□ 0
SMG6-220ENST00000576218 PTPRCAPQ14761 206 aa15.07■□□□□ 0
SMG6-220ENST00000576218 SEPT7Q16181 437 aaKnown RBP15.07■□□□□ 0
SMG6-220ENST00000576218 SPRED1Q7Z699 444 aa15.07■□□□□ 0
SMG6-220ENST00000576218 TRIM48Q8IWZ4 208 aa15.07■□□□□ 0
SMG6-220ENST00000576218 NAGSQ8N159 534 aa15.07■□□□□ 0
SMG6-220ENST00000576218 ARL14Q8N4G2 192 aa15.07■□□□□ 0
SMG6-220ENST00000576218 GRAMD1AQ96CP6 724 aa15.07■□□□□ 0
SMG6-220ENST00000576218 DCUN1D1Q96GG9 259 aa15.07■□□□□ 0
SMG6-220ENST00000576218 ATXN7L3BQ96GX2 97 aa15.07■□□□□ 0
SMG6-220ENST00000576218 AHCYL2Q96HN2 611 aaKnown RBP15.07■□□□□ 0
SMG6-220ENST00000576218 TLR10Q9BXR5 811 aa15.07■□□□□ 0
SMG6-220ENST00000576218 ASB8Q9H765 288 aa15.07■□□□□ 0
SMG6-220ENST00000576218 UGT1A7Q9HAW7 530 aa15.07■□□□□ 0
SMG6-220ENST00000576218 UGT1A10Q9HAW8 530 aa15.07■□□□□ 0
SMG6-220ENST00000576218 UGT1A8Q9HAW9 530 aa15.07■□□□□ 0
SMG6-220ENST00000576218 RAB6BQ9NRW1 208 aa15.07■□□□□ 0
SMG6-220ENST00000576218 PIH1D1Q9NWS0 290 aaKnown RBP15.07■□□□□ 0
SMG6-220ENST00000576218 TRMT1Q9NXH9 659 aaKnown RBP15.07■□□□□ 0
SMG6-220ENST00000576218 PAK5Q9P286 719 aa15.07■□□□□ 0
SMG6-220ENST00000576218 FKBPLQ9UIM3 349 aa15.07■□□□□ 0
SMG6-220ENST00000576218 ZKSCAN5Q9Y2L8 839 aa15.07■□□□□ 0
SMG6-220ENST00000576218 JRKLQ9Y4A0 524 aa15.07■□□□□ 0
SMG6-220ENST00000576218 SLC30A1Q9Y6M5 507 aa15.07■□□□□ 0
SMG6-220ENST00000576218 PLXNB3Q9ULL4 1909 aa15.07■□□□□ 0
SMG6-220ENST00000576218 FRYQ5TBA9 3013 aa15.06■□□□□ 0
SMG6-220ENST00000576218 ERI2A8K979 691 aaKnown RBP15.06■□□□□ 0
SMG6-220ENST00000576218 D6RAR5 112 aa15.06■□□□□ 0
SMG6-220ENST00000576218 TMX2-CTNND1H3BSU7 103 aa15.06■□□□□ 0
SMG6-220ENST00000576218 MPOP05164 745 aa15.06■□□□□ 0
SMG6-220ENST00000576218 RALBP11234 206 aa15.06■□□□□ 0
SMG6-220ENST00000576218 ZNF7P17097 686 aaPredicted RBP15.06■□□□□ 0
SMG6-220ENST00000576218 TPH1P17752 444 aa15.06■□□□□ 0
SMG6-220ENST00000576218 ITGALP20701 1170 aa15.06■□□□□ 0
SMG6-220ENST00000576218 INHBCP55103 352 aa15.06■□□□□ 0
SMG6-220ENST00000576218 TMEM115Q12893 351 aaPredicted RBP15.06■□□□□ 0
SMG6-220ENST00000576218 POU6F1Q14863 301 aa15.06■□□□□ 0
SMG6-220ENST00000576218 OASLQ15646 514 aaKnown RBP15.06■□□□□ 0
SMG6-220ENST00000576218 CCNG2Q16589 344 aa15.06■□□□□ 0
SMG6-220ENST00000576218 SLC9B2Q86UD5 537 aa15.06■□□□□ 0
SMG6-220ENST00000576218 PROSER1Q86XN7 944 aa15.06■□□□□ 0
SMG6-220ENST00000576218 OR13C4Q8NGS5 318 aa15.06■□□□□ 0
SMG6-220ENST00000576218 ZNF398Q8TD17 642 aa15.06■□□□□ 0
SMG6-220ENST00000576218 RTP4Q96DX8 246 aa15.06■□□□□ 0
SMG6-220ENST00000576218 TMEM74Q96NL1 305 aa15.06■□□□□ 0
SMG6-220ENST00000576218 DCBLD2Q96PD2 775 aa15.06■□□□□ 0
SMG6-220ENST00000576218 SLC38A3Q99624 504 aa15.06■□□□□ 0
SMG6-220ENST00000576218 HOMER3Q9NSC5 361 aa15.06■□□□□ 0
SMG6-220ENST00000576218 KCNK4Q9NYG8 393 aa15.06■□□□□ 0
SMG6-220ENST00000576218 AKAP7Q9P0M2 348 aaPredicted RBP15.06■□□□□ 0
SMG6-220ENST00000576218 ATXN7L1Q9ULK2 861 aaPredicted RBP15.06■□□□□ 0
SMG6-220ENST00000576218 KCTD3Q9Y597 815 aa15.06■□□□□ 0
SMG6-220ENST00000576218 KNTC1P50748 2209 aa15.06■□□□□ 0
SMG6-220ENST00000576218 SPEGQ15772 3267 aa15.06■□□□□ 0
SMG6-220ENST00000576218 CFAP99D6REC4 459 aa15.05■□□□□ -0
SMG6-220ENST00000576218 AGRPO00253 132 aa15.05■□□□□ -0
SMG6-220ENST00000576218 GPR39O43194 453 aa15.05■□□□□ -0
SMG6-220ENST00000576218 BRINP1O60477 761 aa15.05■□□□□ -0
SMG6-220ENST00000576218 SRP72O76094 671 aaKnown RBP15.05■□□□□ -0
SMG6-220ENST00000576218 RBMS1P29558 406 aaKnown RBP15.05■□□□□ -0
SMG6-220ENST00000576218 PBLDP30039 288 aaPredicted RBP15.05■□□□□ -0
SMG6-220ENST00000576218 MAPK9P45984 424 aa15.05■□□□□ -0
SMG6-220ENST00000576218 OR1D5P58170 312 aa15.05■□□□□ -0
SMG6-220ENST00000576218 BASP1P80723 227 aaKnown RBP15.05■□□□□ -0
SMG6-220ENST00000576218 HHEXQ03014 270 aa15.05■□□□□ -0
SMG6-220ENST00000576218 CDH17Q12864 832 aa15.05■□□□□ -0
SMG6-220ENST00000576218 NFATC2Q13469 925 aa15.05■□□□□ -0
SMG6-220ENST00000576218 ZRANB3Q5FWF4 1079 aa15.05■□□□□ -0
SMG6-220ENST00000576218 PHF19Q5T6S3 580 aa15.05■□□□□ -0
SMG6-220ENST00000576218 GPRC6AQ5T6X5 926 aa15.05■□□□□ -0
SMG6-220ENST00000576218 DET1Q7L5Y6 550 aa15.05■□□□□ -0
SMG6-220ENST00000576218 PIM3Q86V86 326 aa15.05■□□□□ -0
SMG6-220ENST00000576218 LSMEM2Q8N112 164 aa15.05■□□□□ -0
SMG6-220ENST00000576218 AVL9Q8NBF6 648 aa15.05■□□□□ -0
SMG6-220ENST00000576218 DDHD1Q8NEL9 900 aa15.05■□□□□ -0
SMG6-220ENST00000576218 DTX3LQ8TDB6 740 aa15.05■□□□□ -0
SMG6-220ENST00000576218 SLC37A2Q8TED4 501 aa15.05■□□□□ -0
SMG6-220ENST00000576218 ULK4Q96C45 1275 aa15.05■□□□□ -0
SMG6-220ENST00000576218 NAP1L3Q99457 506 aaPredicted RBP15.05■□□□□ -0
SMG6-220ENST00000576218 TIMM29Q9BSF4 260 aa15.05■□□□□ -0
SMG6-220ENST00000576218 FOXP3Q9BZS1 431 aa15.05■□□□□ -0
SMG6-220ENST00000576218 POLR1BQ9H9Y6 1135 aa15.05■□□□□ -0
SMG6-220ENST00000576218 ETNK1Q9HBU6 452 aa15.05■□□□□ -0
SMG6-220ENST00000576218 TBC1D29Q9UFV1 150 aa15.05■□□□□ -0
SMG6-220ENST00000576218 SATB2Q9UPW6 733 aa15.05■□□□□ -0
SMG6-220ENST00000576218 RAXQ9Y2V3 346 aa15.05■□□□□ -0
SMG6-220ENST00000576218 PCYT1BQ9Y5K3 369 aaPredicted RBP15.05■□□□□ -0
SMG6-220ENST00000576218 ST14Q9Y5Y6 855 aa15.05■□□□□ -0
SMG6-220ENST00000576218 ASXL3Q9C0F0 2248 aa15.04■□□□□ -0
SMG6-220ENST00000576218 RP1P56715 2156 aa15.04■□□□□ -0
SMG6-220ENST00000576218 SCN8AQ9UQD0 1980 aa15.04■□□□□ -0
SMG6-220ENST00000576218 CCDC187A0A096LP49 1063 aa15.04■□□□□ -0
SMG6-220ENST00000576218 KIR2DS5A0A0G2JLQ3 304 aa15.04■□□□□ -0
SMG6-220ENST00000576218 A0A0G2JNG1 304 aa15.04■□□□□ -0
SMG6-220ENST00000576218 A0A1W2PQM1 296 aa15.04■□□□□ -0
SMG6-220ENST00000576218 CCDC78A2IDD5 438 aa15.04■□□□□ -0
SMG6-220ENST00000576218 OR2AG2A6NM03 316 aa15.04■□□□□ -0
SMG6-220ENST00000576218 OR5K4A6NMS3 321 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms