RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 KLC4Q9NSK0 619 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 PARVAQ9NVD7 372 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 PKD2L2Q9NZM6 624 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 SLC5A6Q9Y289 635 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 PPIL1Q9Y3C6 166 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 C2CD3Q4AC94 2353 aa11.77□□□□□ -0.53
CTNS-208ENST00000574218 DIDO1Q9BTC0 2240 aaKnown RBP11.76□□□□□ -0.53
CTNS-208ENST00000574218 A0A0U1RQS6 177 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 TCRBV5S1A1TA0A578 114 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 NUAK1O60285 661 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 CLDN1O95832 211 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 XRCC1P18887 633 aaPredicted RBP11.76□□□□□ -0.53
CTNS-208ENST00000574218 CAPZBP47756 277 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 HCAR3P49019 387 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 RPS18P62269 152 aaKnown RBP11.76□□□□□ -0.53
CTNS-208ENST00000574218 UBE2IP63279 158 aaKnown RBP11.76□□□□□ -0.53
CTNS-208ENST00000574218 TUBB3Q13509 450 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 BECN1Q14457 450 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 PRR30Q53SZ7 412 aaPredicted RBP11.76□□□□□ -0.53
CTNS-208ENST00000574218 TDRD12Q587J7 1177 aaKnown RBP11.76□□□□□ -0.53
CTNS-208ENST00000574218 JMJD6Q6NYC1 403 aaPredicted RBP11.76□□□□□ -0.53
CTNS-208ENST00000574218 TP53INP2Q8IXH6 220 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 RAVER1Q8IY67 606 aaKnown RBP11.76□□□□□ -0.53
CTNS-208ENST00000574218 TTC13Q8NBP0 860 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 NEK11Q8NG66 645 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 CCHCR1Q8TD31 782 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 CXorf40BQ96DE9 158 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 FCRL4Q96PJ5 515 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 AGPAT1Q99943 283 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 POLR1EQ9GZS1 481 aaKnown RBP11.76□□□□□ -0.53
CTNS-208ENST00000574218 FAM83DQ9H4H8 585 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 OGFRQ9NZT2 677 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 ERRFI1Q9UJM3 462 aaPredicted RBP11.76□□□□□ -0.53
CTNS-208ENST00000574218 TTLL3Q9Y4R7 772 aa11.76□□□□□ -0.53
CTNS-208ENST00000574218 PCYT1BQ9Y5K3 369 aaPredicted RBP11.76□□□□□ -0.53
CTNS-208ENST00000574218 LDLRP01130 860 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 PDHA1P08559 390 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 CCDC172P0C7W6 258 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 NELFEP18615 380 aaKnown RBP11.75□□□□□ -0.53
CTNS-208ENST00000574218 MIPP30301 263 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 KLK7P49862 253 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 CLCNKAP51800 687 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 OGDHQ02218 1023 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 ACY1Q03154 408 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 DPYSQ14117 519 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 NR6A1Q15406 480 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 SEPT7Q16181 437 aaKnown RBP11.75□□□□□ -0.53
CTNS-208ENST00000574218 PLA2G4EQ3MJ16 856 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 ZNF569Q5MCW4 686 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 PAPD7Q5XG87 772 aaKnown RBP11.75□□□□□ -0.53
CTNS-208ENST00000574218 ACAD10Q6JQN1 1059 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 BPHLQ86WA6 291 aaPredicted RBP11.75□□□□□ -0.53
CTNS-208ENST00000574218 RBM12BQ8IXT5 1001 aaKnown RBP11.75□□□□□ -0.53
CTNS-208ENST00000574218 MCOLN2Q8IZK6 566 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 SLC34A3Q8N130 599 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 AOPEPQ8N6M6 819 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 UBXN4Q92575 508 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 MR1Q95460 341 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 PNPLA2Q96AD5 504 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 PEBP4Q96S96 227 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 SAMSN1Q9NSI8 373 aaKnown RBP11.75□□□□□ -0.53
CTNS-208ENST00000574218 POT1Q9NUX5 634 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 CWC15Q9P013 229 aaKnown RBP11.75□□□□□ -0.53
CTNS-208ENST00000574218 FARSAQ9Y285 508 aaKnown RBP11.75□□□□□ -0.53
CTNS-208ENST00000574218 SLC30A1Q9Y6M5 507 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 PIKFYVEQ9Y2I7 2098 aa11.75□□□□□ -0.53
CTNS-208ENST00000574218 C1orf232A0A0U1RR37 186 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 GPR89AB7ZAQ6 455 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 KIF1CO43896 1103 aaKnown RBP11.74□□□□□ -0.53
CTNS-208ENST00000574218 MAFKO60675 156 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 CPNE3O75131 537 aaKnown RBP11.74□□□□□ -0.53
CTNS-208ENST00000574218 CLDN7O95471 211 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 KLK3P07288 261 aaPredicted RBP11.74□□□□□ -0.53
CTNS-208ENST00000574218 GPR89BP0CG08 455 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 AMPD1P23109 780 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 CES1P23141 567 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 PTGIRP43119 386 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 ZRANB3Q5FWF4 1079 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 SLC6A19Q695T7 634 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 PWWP2BQ6NUJ5 590 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 FAM199XQ6PEV8 388 aaPredicted RBP11.74□□□□□ -0.53
CTNS-208ENST00000574218 KLHL35Q6PF15 583 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 CRTC3Q6UUV7 619 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 IQCKQ8N0W5 287 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.74□□□□□ -0.53
CTNS-208ENST00000574218 LPCAT1Q8NF37 534 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 KLHL6Q8WZ60 621 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 RSC1A1Q92681 617 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 OR2AG1Q9H205 316 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 MLXIPLQ9NP71 852 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 WASH6PQ9NQA3 447 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 GPR83Q9NYM4 423 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 ATXN10Q9UBB4 475 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 SNX7Q9UNH6 387 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 CHKBQ9Y259 395 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 DNAJC16Q9Y2G8 782 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 SIK3Q9Y2K2 1263 aa11.74□□□□□ -0.53
CTNS-208ENST00000574218 SSU72P8A0A1W2PR75 194 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 RGSL1A5PLK6 1076 aa11.73□□□□□ -0.53
CTNS-208ENST00000574218 A6NL46 340 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms