RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 RALGPS2Q86X27 583 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 SPOCK2Q92563 424 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 NXPE3Q969Y0 559 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 DNAJC28Q9NX36 388 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 AKAP7Q9P0M2 348 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 KLQ9UEF7 1012 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 CDH22Q9UJ99 828 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 TEX264Q9Y6I9 313 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 ZDHHC11BP0C7U3 371 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 ALOX15P16050 662 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 CCR2P41597 374 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 GNPDA1P46926 289 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 CDH13P55290 713 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 FOXD4Q12950 439 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 NAPRTQ6XQN6 538 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 CAND1Q86VP6 1230 aaKnown RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 C2orf73Q8N5S3 287 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 ZNF75CPQ92670 426 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 MYADMQ96S97 322 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 GPR174Q9BXC1 333 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 MAGEE1Q9HCI5 957 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 NDOR1Q9UHB4 597 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 NPEPPSL1A6NEC2 478 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 ANKDD1BA6NHY2 528 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 TXNDC9O14530 226 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 NIPSNAP2O75323 286 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 KLHL2O95198 593 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 F7P08709 466 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 ETV3P41162 512 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 PLOD1Q02809 727 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 PTK2BQ14289 1009 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 PAGE2BQ5JRK9 111 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 SIX5Q8N196 739 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 SH3GL2Q99962 352 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 MRGBPQ9NV56 204 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 ZNF180Q9UJW8 692 aa10.03□□□□□ -0.8
SMG6-213ENST00000573166 COLQQ9Y215 455 aaPredicted RBP10.03□□□□□ -0.8
SMG6-213ENST00000573166 A0A1W2PQU0 124 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 WDR47O94967 919 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 EIF2S1P05198 315 aaKnown RBP10.02□□□□□ -0.81
SMG6-213ENST00000573166 SLC2A4P14672 509 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 PXNP49023 591 aaPredicted RBP10.02□□□□□ -0.81
SMG6-213ENST00000573166 NME5P56597 212 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 KCNK10P57789 538 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 MSLNQ13421 630 aaPredicted RBP10.02□□□□□ -0.81
SMG6-213ENST00000573166 ZNF460Q14592 562 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 PUS10Q3MIT2 529 aaKnown RBP10.02□□□□□ -0.81
SMG6-213ENST00000573166 SLC44A4Q53GD3 710 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 NCEH1Q6PIU2 408 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 PIWIL4Q7Z3Z4 852 aaKnown RBP10.02□□□□□ -0.81
SMG6-213ENST00000573166 LIMS2Q7Z4I7 341 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 ZDHHC14Q8IZN3 488 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 SIDT2Q8NBJ9 832 aaKnown RBP10.02□□□□□ -0.81
SMG6-213ENST00000573166 PRICKLE1Q96MT3 831 aaPredicted RBP10.02□□□□□ -0.81
SMG6-213ENST00000573166 GBP5Q96PP8 586 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 COG4Q9H9E3 785 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 AHSPQ9NZD4 102 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.02□□□□□ -0.81
SMG6-213ENST00000573166 E9PBE3 544 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 PLK4O00444 970 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 KLHL41O60662 606 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 ATP5HO75947 161 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 RPIAP49247 311 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 SGSHP51688 502 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 RPS21P63220 83 aaKnown RBP10.02□□□□□ -0.81
SMG6-213ENST00000573166 PLIN5Q00G26 463 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 FUT11Q495W5 492 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 CYB5D1Q6P9G0 228 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 KLHL35Q6PF15 583 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 TRIM74Q86UV6 250 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 OR2T3Q8NH03 318 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 SELENOMQ8WWX9 145 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 ASB2Q96Q27 587 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 MGME1Q9BQP7 344 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 KIFC1Q9BW19 673 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 MRPL1Q9BYD6 325 aaKnown RBP10.02□□□□□ -0.81
SMG6-213ENST00000573166 PARVBQ9HBI1 364 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 THEGQ9P2T0 379 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 HEY2Q9UBP5 337 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 KANSL1LA0AUZ9 987 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 GNGT2O14610 69 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 FFAR3O14843 346 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 GPR42O15529 346 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 TSPAN6O43657 245 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 COL6A2P12110 1019 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 C5AR1P21730 350 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 DNAJB1P25685 340 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 RPL34P49207 117 aaKnown RBP10.02□□□□□ -0.81
SMG6-213ENST00000573166 RPL6Q02878 288 aaKnown RBP10.02□□□□□ -0.81
SMG6-213ENST00000573166 CPSF6Q16630 551 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMG6-213ENST00000573166 GPRC6AQ5T6X5 926 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 PKMYT1Q99640 499 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 ATG10Q9H0Y0 220 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 OBP2AQ9NY56 170 aa10.02□□□□□ -0.81
SMG6-213ENST00000573166 IQCF5A8MTL0 148 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 AIM2O14862 343 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 MAPK1P28482 360 aa10.01□□□□□ -0.81
SMG6-213ENST00000573166 CD68P34810 354 aaPredicted RBP10.01□□□□□ -0.81
SMG6-213ENST00000573166 POLD2P49005 469 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms