RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 GPLD1P80108 840 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 SQSTM1Q13501 440 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 PLA2G4EQ3MJ16 856 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 SIRPB2Q5JXA9 342 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 SNAP47Q5SQN1 464 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 KIAA1614Q5VZ46 1190 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 PDPK2PQ6A1A2 396 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 PCSK4Q6UW60 755 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 BBS12Q6ZW61 710 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 SLC9B2Q86UD5 537 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 TMTC1Q8IUR5 882 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 IPMKQ8NFU5 416 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 OXNAD1Q96HP4 312 aaPredicted RBP20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 MRFAP1L1Q96HT8 127 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 VAT1Q99536 393 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 HERPUD2Q9BSE4 406 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 SARS2Q9NP81 518 aaKnown RBP20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 NFKBIL1Q9UBC1 381 aaPredicted RBP20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 DUSP10Q9Y6W6 482 aa20.54■□□□□ 0.88
CHRNB1-204ENST00000572857 A6NCN8 305 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 HACD1B0YJ81 288 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 EFSO43281 561 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 LIPCP11150 499 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 FGF3P11487 239 aaPredicted RBP20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 F3P13726 295 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 SLC2A4P14672 509 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 SRSF6Q13247 344 aaKnown RBP20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 TRA2AQ13595 282 aaKnown RBP eCLIP20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 PPP2R5EQ16537 467 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 INSCQ1MX18 579 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 TMEM71Q6P5X7 295 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 LSM14AQ8ND56 463 aaKnown RBP20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 AGBL5Q8NDL9 886 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 GDAP1Q8TB36 358 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 SNRNP27Q8WVK2 155 aaKnown RBP20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 NCSTNQ92542 709 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 SH3KBP1Q96B97 665 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 MRGPRX2Q96LB1 330 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 FCRL5Q96RD9 977 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 DPYSL5Q9BPU6 564 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 SLC23A2Q9UGH3 650 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 RSPH14Q9UHP6 348 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 DNAJC16Q9Y2G8 782 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 PCDHB11Q9Y5F2 797 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 ADGRG1Q9Y653 693 aa20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 SMG1Q96Q15 3661 aaKnown RBP20.53■□□□□ 0.88
CHRNB1-204ENST00000572857 KIR2DS5A0A0G2JLQ3 304 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 A0A0G2JNG1 304 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 MACROD2A1Z1Q3 448 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 A8MU76 341 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 KIR2DS3K7RE56 304 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 DUX1O43812 170 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 CDK14O94921 469 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 EPOP01588 193 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 THRAP10827 490 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 RBL1P28749 1068 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 C19orf57Q0VDD7 668 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 KIR2DS5Q14953 304 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 ATP13A5Q4VNC0 1218 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 KHDC1Q4VXA5 237 aaKnown RBP20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 BLOC1S5Q8TDH9 187 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 JPH3Q8WXH2 748 aaPredicted RBP20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 TAAR9Q96RI9 348 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 TRABDQ9H4I3 376 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 CPNE7Q9UBL6 633 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 TRHDEQ9UKU6 1024 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 TMPRSS11EQ9UL52 423 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 PCDHA3Q9Y5H8 950 aa20.52■□□□□ 0.88
CHRNB1-204ENST00000572857 BAHCC1Q9P281 2608 aa20.52■□□□□ 0.87
CHRNB1-204ENST00000572857 OR5K4A6NMS3 321 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 GPR89AB7ZAQ6 455 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 APOC4-APOC2K7ER74 178 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 CHUKO15111 745 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 KMOO15229 486 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 BUD23O43709 281 aaKnown RBP20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 C1QL1O75973 258 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 APOC2P02655 101 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 GPR89BP0CG08 455 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 ZNF7P17097 686 aaPredicted RBP20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 CTNNA1P35221 906 aaKnown RBP20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 HMGCLP35914 325 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 COPS2P61201 443 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 XRCC4Q13426 336 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 SLC1A5Q15758 541 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 SEPT7Q16181 437 aaKnown RBP20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 RAD9BQ6WBX8 426 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 VASH2Q86V25 355 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 LRRTM4Q86VH4 590 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 FAM129CQ86XR2 697 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 TTC30BQ8N4P2 665 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 ART4Q93070 314 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 PMEPA1Q969W9 287 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 PLEKHG4BQ96PX9 1271 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 FSD1LQ9BXM9 530 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 IL26Q9NPH9 171 aa20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 REXO2Q9Y3B8 237 aaKnown RBP20.51■□□□□ 0.87
CHRNB1-204ENST00000572857 PDZK1P1A8MUH7 402 aa20.5■□□□□ 0.87
CHRNB1-204ENST00000572857 VEGFDO43915 354 aa20.5■□□□□ 0.87
CHRNB1-204ENST00000572857 CTNNA2P26232 953 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms