RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 NUP85Q9BW27 656 aa9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 CEP41Q9BYV8 373 aa9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 FRMD8Q9BZ67 464 aaPredicted RBP9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 TRIM4Q9C037 500 aa9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 ACBD3Q9H3P7 528 aa9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 DPEP2Q9H4A9 486 aa9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 WDR26Q9H7D7 661 aa9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 ARFGAP3Q9NP61 516 aa9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 TMEM51Q9NW97 253 aa9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 LRIT1Q9P2V4 623 aa9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 ANAPC7Q9UJX3 599 aa9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 SUFUQ9UMX1 484 aa9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 OAS3Q9Y6K5 1087 aaKnown RBP9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 DGKBQ9Y6T7 804 aa9.2□□□□□ -0.94
NPLOC4-210ENST00000572824 K7ENP7 123 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 PGLSO95336 258 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 FGF1P05230 155 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 HLA-DQB2P05538 268 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 ITGA2BP08514 1039 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 MYCLP1P12525 358 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 HTR1BP28222 390 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 VIPR1P32241 457 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 MMP13P45452 471 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 PREPP48147 710 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 ZNF165P49910 485 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 ARSEP51690 589 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 CDH6P55285 790 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 AP1S1P61966 158 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 B4GALNT1Q00973 533 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 ID3Q02535 119 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 NIPAL4Q0D2K0 466 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 DPYSL3Q14195 570 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 LINC00303Q3SY05 128 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 ZNF648Q5T619 568 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 PHF19Q5T6S3 580 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 LRRC66Q68CR7 880 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 NCBP2-AS2Q69YL0 99 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 RAET1GQ6H3X3 334 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 INO80CQ6PI98 192 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 OGFOD3Q6PK18 319 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 TMCO3Q6UWJ1 677 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 MICALCLQ6ZW33 695 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 NAGSQ8N159 534 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 CBARPQ8N350 705 aaPredicted RBP9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 ATPAF2Q8N5M1 289 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 HCAR2Q8TDS4 363 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 EXTL1Q92935 676 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 USP7Q93009 1102 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 NUDCD1Q96RS6 583 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 SEMA3CQ99985 751 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 ISCUQ9H1K1 167 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 ABCG8Q9H221 673 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 DTLQ9NZJ0 730 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 CRIM1Q9NZV1 1036 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 TAAR2Q9P1P5 351 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 MYO6Q9UM54 1294 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 NENFQ9UMX5 172 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 RELNP78509 3460 aa9.19□□□□□ -0.94
NPLOC4-210ENST00000572824 A0A1W2PQC6 194 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 PPM1DO15297 605 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 INPP4BO15327 924 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 RNF8O76064 485 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 MBD3O95983 291 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 PRLP01236 227 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 GYPCP04921 128 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 GZMAP12544 262 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 CCNB1P14635 433 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 ALDH4A1P30038 563 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 CCKBRP32239 447 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 HTR7P34969 479 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 PCK1P35558 622 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 BLKP51451 505 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 SUOXP51687 545 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 GBE1Q04446 702 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 ZFP36L1Q07352 338 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 SLC10A2Q12908 348 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 ZBTB17Q13105 803 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 GRM3Q14832 879 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 PLA2G4EQ3MJ16 856 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 MAP9Q49MG5 647 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 COLEC12Q5KU26 742 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 BROXQ5VW32 411 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 LRFN4Q6PJG9 635 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 TECPR1Q7Z6L1 1165 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 LSMEM2Q8N112 164 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 ARL14Q8N4G2 192 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 PQLC3Q8N755 202 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 C2CD4AQ8NCU7 369 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 FAM46AQ96IP4 442 aaKnown RBP9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 EAF1Q96JC9 268 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 CCDC74BQ96LY2 380 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 MCCC1Q96RQ3 725 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 WDR24Q96S15 920 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 BPIFA3Q9BQP9 254 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 SSBP4Q9BWG4 385 aaPredicted RBP9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 TEX101Q9BY14 249 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 NCKIPSDQ9NZQ3 722 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 CHKBQ9Y259 395 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 DOPEY2Q9Y3R5 2298 aa9.18□□□□□ -0.94
NPLOC4-210ENST00000572824 TTLL3Q9Y4R7 772 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms