RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 RAD18Q9NS91 495 aa20.42■□□□□ 0.86
LITAF-205ENST00000570904 KLC4Q9NSK0 619 aa20.42■□□□□ 0.86
LITAF-205ENST00000570904 OCIAD1Q9NX40 245 aa20.42■□□□□ 0.86
LITAF-205ENST00000570904 ALG6Q9Y672 507 aa20.42■□□□□ 0.86
LITAF-205ENST00000570904 COL6A6A6NMZ7 2263 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 EFCAB7A8K855 629 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 A8MU76 341 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 STMND1H3BQB6 276 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 MTX2O75431 263 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 NFKB1P19838 968 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 MARCKSL1P49006 195 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 CCDC70Q6NSX1 233 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 ZC3H18Q86VM9 953 aaKnown RBP20.41■□□□□ 0.86
LITAF-205ENST00000570904 CCDC112Q8NEF3 446 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 NCSTNQ92542 709 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 TBC1D10AQ9BXI6 508 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 TRIM39Q9HCM9 518 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 BPIFA1Q9NP55 256 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 PDP2Q9P2J9 529 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 PCDHGA4Q9Y5G9 962 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 PCDHGA3Q9Y5H0 932 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 B3GALT1Q9Y5Z6 326 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 SDK2Q58EX2 2172 aa20.41■□□□□ 0.86
LITAF-205ENST00000570904 KIR2DS5A0A0G2JLQ3 304 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 A0A0G2JNG1 304 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.4■□□□□ 0.86
LITAF-205ENST00000570904 KIR2DS3K7RE56 304 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 SLC2A4P14672 509 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 HADHBP55084 474 aaKnown RBP20.4■□□□□ 0.86
LITAF-205ENST00000570904 WNT3AP56704 352 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 KIR2DS5Q14953 304 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 INSCQ1MX18 579 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 KHDC1Q4VXA5 237 aaKnown RBP20.4■□□□□ 0.86
LITAF-205ENST00000570904 PDPK2PQ6A1A2 396 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 KDELC1Q6UW63 502 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 SH3KBP1Q96B97 665 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 TRIM5Q9C035 493 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 SLC39A1Q9NY26 324 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 SCHIP1Q9P0W5 487 aaPredicted RBP20.4■□□□□ 0.86
LITAF-205ENST00000570904 KLHL8Q9P2G9 620 aaPredicted RBP20.4■□□□□ 0.86
LITAF-205ENST00000570904 CPNE7Q9UBL6 633 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 SLC23A2Q9UGH3 650 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 FAM153AQ9UHL3 310 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 BSNQ9UPA5 3926 aa20.4■□□□□ 0.86
LITAF-205ENST00000570904 hCG_1818297A0A087WSY0 165 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 CHUKO15111 745 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 ZIC2O95409 532 aaPredicted RBP20.39■□□□□ 0.85
LITAF-205ENST00000570904 CLCNKAP51800 687 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 UBE2IP63279 158 aaKnown RBP20.39■□□□□ 0.85
LITAF-205ENST00000570904 TFDP3Q5H9I0 405 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 WDR74Q6RFH5 385 aaPredicted RBP20.39■□□□□ 0.85
LITAF-205ENST00000570904 SARM1Q6SZW1 724 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 CCDC50Q8IVM0 306 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 KATNAL2Q8IYT4 538 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 SLC25A41Q8N5S1 370 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 P3H4Q92791 437 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 EXTL1Q92935 676 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 MED8Q96G25 268 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 DDA1Q9BW61 102 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 KLHL3Q9UH77 587 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 TMPRSS11EQ9UL52 423 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 DNAJC16Q9Y2G8 782 aa20.39■□□□□ 0.85
LITAF-205ENST00000570904 B4E171 279 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 GPR89AB7ZAQ6 455 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 ZRANB2O95218 330 aaKnown RBP eCLIP20.38■□□□□ 0.85
LITAF-205ENST00000570904 GPR89BP0CG08 455 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 TSPAN7P41732 249 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 CHRNA4P43681 627 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 EPHA4P54764 986 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 CYP4F2P78329 520 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 SEPT7Q16181 437 aaKnown RBP20.38■□□□□ 0.85
LITAF-205ENST00000570904 LINC00303Q3SY05 128 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 ATP13A5Q4VNC0 1218 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 ANKS6Q68DC2 871 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 ARHGAP22Q7Z5H3 698 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 LRRTM4Q86VH4 590 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 ZNF567Q8N184 647 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 BMPERQ8N8U9 685 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 EXD3Q8N9H8 876 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 KRT35Q92764 455 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 NKD1Q969G9 470 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 OXNAD1Q96HP4 312 aaPredicted RBP20.38■□□□□ 0.85
LITAF-205ENST00000570904 MRGPRX2Q96LB1 330 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 QKIQ96PU8 341 aaKnown RBP eCLIP20.38■□□□□ 0.857e-9■■■■■ 34.6
LITAF-205ENST00000570904 PLEKHG4BQ96PX9 1271 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 PCDHA13Q9Y5I0 950 aa20.38■□□□□ 0.85
LITAF-205ENST00000570904 LOC285095A0A1B0GVY8 99 aa20.37■□□□□ 0.85
LITAF-205ENST00000570904 OR5K4A6NMS3 321 aa20.37■□□□□ 0.85
LITAF-205ENST00000570904 PDZK1P1A8MUH7 402 aa20.37■□□□□ 0.85
LITAF-205ENST00000570904 KMOO15229 486 aa20.37■□□□□ 0.85
LITAF-205ENST00000570904 CDK14O94921 469 aa20.37■□□□□ 0.85
LITAF-205ENST00000570904 LCA5LO95447 670 aa20.37■□□□□ 0.85
LITAF-205ENST00000570904 ZNF7P17097 686 aaPredicted RBP20.37■□□□□ 0.85
LITAF-205ENST00000570904 UGT1A3P35503 534 aa20.37■□□□□ 0.85
LITAF-205ENST00000570904 ATP1A2P50993 1020 aa20.37■□□□□ 0.85
LITAF-205ENST00000570904 SIRPB2Q5JXA9 342 aa20.37■□□□□ 0.85
LITAF-205ENST00000570904 C11orf63Q6NUN7 778 aa20.37■□□□□ 0.85
LITAF-205ENST00000570904 ZNF547Q8IVP9 402 aa20.37■□□□□ 0.85
LITAF-205ENST00000570904 TTC30BQ8N4P2 665 aa20.37■□□□□ 0.85
LITAF-205ENST00000570904 ZSCAN1Q8NBB4 408 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms