RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PPP1CAP62136 330 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 PDE1BQ01064 536 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 IL10RBQ08334 325 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 SLC10A7Q0GE19 358 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 GPS2Q13227 327 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 VWA5B1Q5TIE3 1220 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 LRRC66Q68CR7 880 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 CYB5D1Q6P9G0 228 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 WDR59Q6PJI9 974 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 CERS6Q6ZMG9 384 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF765Q7L2R6 523 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 PGBD5Q8N414 524 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZBTB2Q8N680 514 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 ENDOVQ8N8Q3 282 aaKnown RBP10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 SIDT2Q8NBJ9 832 aaKnown RBP10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 SLC38A9Q8NBW4 561 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 SLC30A5Q8TAD4 765 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 SNX21Q969T3 373 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 SLC41A2Q96JW4 573 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 C11orf70Q9BRQ4 267 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 RIOK2Q9BVS4 552 aaKnown RBP10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 ILKAPQ9H0C8 392 aaPredicted RBP10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 SP110Q9HB58 689 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 NOD2Q9HC29 1040 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 WASH6PQ9NQA3 447 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 SEMA5BQ9P283 1151 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 COPG2Q9UBF2 871 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 PPIL1Q9Y3C6 166 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 PCDHGA10Q9Y5H3 936 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 NUP210LQ5VU65 1888 aa10.27□□□□□ -0.77
CTDNEP1-202ENST00000570380 NIPBLQ6KC79 2804 aaeCLIP10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 PCM1Q15154 2024 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 DFFAO00273 331 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 E2F3O00716 465 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 CCP110O43303 1012 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 PGLSO95336 258 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 PYGLP06737 847 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 EBLN1P0CF75 366 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 KRT3P12035 628 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 CA5AP35218 305 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 RENBPP51606 427 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 CLCNKAP51800 687 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 ATP1A4Q13733 1029 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 LBRQ14739 615 aaKnown RBP10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 IRGCQ6NXR0 463 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 IGFL3Q6UXB1 125 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 SPNS3Q6ZMD2 512 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 CUZD1Q86UP6 607 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 BPHLQ86WA6 291 aaPredicted RBP10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 AOPEPQ8N6M6 819 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 SLC20A1Q8WUM9 679 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 PIH1D2Q8WWB5 315 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZDHHC12Q96GR4 267 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 NUDCD1Q96RS6 583 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 RAB33BQ9H082 229 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 RMI1Q9H9A7 625 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 AGPAT4Q9NRZ5 378 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 TMEM63CQ9P1W3 806 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 EPHA6Q9UF33 1036 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 TCFL5Q9UL49 500 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 SNX7Q9UNH6 387 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 SIK3Q9Y2K2 1263 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 FHOD1Q9Y613 1164 aa10.26□□□□□ -0.77
CTDNEP1-202ENST00000570380 FADS2P1A8MWK0 482 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 GRID2O43424 1007 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 NUAK1O60285 661 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 CPNE3O75131 537 aaKnown RBP10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 SCRG1O75711 98 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 FGFR1OPO95684 399 aaKnown RBP10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 CYP1A1P04798 512 aaPredicted RBP10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 CAPN1P07384 714 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 PDHA1P08559 390 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 SNRPB2P08579 225 aaKnown RBP10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 RAB40ALP0C0E4 278 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 HTR7P34969 479 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 PTGER4P35408 488 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 AIF1P55008 147 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 RRADP55042 308 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 ACY1Q03154 408 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 PTP4A2Q12974 167 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 ART3Q13508 389 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 LLGL1Q15334 1064 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 KYNUQ16719 465 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 ANO6Q4KMQ2 910 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 MIIPQ5JXC2 388 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 LYPLAL1Q5VWZ2 237 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 HGSNATQ68CP4 663 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 Q6ZS92 163 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 USP45Q70EL2 814 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 FJX1Q86VR8 437 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 PHYKPLQ8IUZ5 450 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 TRIM48Q8IWZ4 208 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 NPWQ8N729 165 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 EPS8L1Q8TE68 723 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 UBXN4Q92575 508 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 SGSM3Q96HU1 749 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 ZNF514Q96K75 400 aaPredicted RBP10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 TIGD1Q96MW7 591 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 WDR24Q96S15 920 aa10.25□□□□□ -0.77
CTDNEP1-202ENST00000570380 MLPHQ9BV36 600 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms