RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 CHRNA6Q15825 494 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 P3H1Q32P28 736 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 TBC1D25Q3MII6 688 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 PLA2G4EQ3MJ16 856 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 CRTC3Q6UUV7 619 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 TMPRSS9Q7Z410 1059 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 ZNF547Q8IVP9 402 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 SFRP1Q8N474 314 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 TRIM58Q8NG06 486 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 SLC37A2Q8TED4 501 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 TLR10Q9BXR5 811 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 FRMD8P1Q9BZ68 369 aaPredicted RBP12.87□□□□□ -0.35
CNOT1-220ENST00000569916 FOXP3Q9BZS1 431 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.87□□□□□ -0.35
CNOT1-220ENST00000569916 SATB2Q9UPW6 733 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 KCTD3Q9Y597 815 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 PKD1L2Q7Z442 2459 aa12.87□□□□□ -0.35
CNOT1-220ENST00000569916 CCDC187A0A096LP49 1063 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 GOLGA6L3A6NEY3 463 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 PRR19A6NJB7 356 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 C2orf81A6NN90 581 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 KMOO15229 486 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 B4GAT1O43505 415 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 UGT1A9O60656 530 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 UGT1A6P19224 532 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 LPOP22079 712 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-220ENST00000569916 UGT1A1P22309 533 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 UGT1A4P22310 534 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 CCKBRP32239 447 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 UGT1A3P35503 534 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 UGT1A5P35504 534 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 CLCNKAP51800 687 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 ZNF140P52738 457 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-220ENST00000569916 INHBCP55103 352 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 OR1D5P58170 312 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 TMEM115Q12893 351 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-220ENST00000569916 ITGA9Q13797 1035 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 INSCQ1MX18 579 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 C11orf96Q7Z7L8 435 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 LRRTM4Q86VH4 590 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 TAB3Q8N5C8 712 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-220ENST00000569916 DDHD1Q8NEL9 900 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 OR4K2Q8NGD2 314 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 OR13C4Q8NGS5 318 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 SNIP1Q8TAD8 396 aaKnown RBP12.86□□□□□ -0.35
CNOT1-220ENST00000569916 BRSK1Q8TDC3 778 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 C1orf54Q8WWF1 131 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 LIN37Q96GY3 246 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-220ENST00000569916 PRR11Q96HE9 360 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-220ENST00000569916 LRRC40Q9H9A6 602 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 UGT1A7Q9HAW7 530 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 UGT1A10Q9HAW8 530 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 UGT1A8Q9HAW9 530 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 EPB41L5Q9HCM4 733 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 ASCL3Q9NQ33 180 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 KLC4Q9NSK0 619 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 SMOXQ9NWM0 555 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 SLC23A2Q9UGH3 650 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 FEZ2Q9UHY8 353 aaPredicted RBP12.86□□□□□ -0.35
CNOT1-220ENST00000569916 FKBPLQ9UIM3 349 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 PCDHGA8Q9Y5G5 932 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 ACACAQ13085 2346 aa12.86□□□□□ -0.35
CNOT1-220ENST00000569916 TRBV23OR9-2A0A075B6M9 112 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 A0A087WV48 116 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 LDB2O43679 373 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 ABCB7O75027 752 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 CDK14O94921 469 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 PRAMEF1O95521 474 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 CRTAMO95727 393 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 AP2A1O95782 977 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 F3P13726 295 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 ZNF7P17097 686 aaPredicted RBP12.85□□□□□ -0.35
CNOT1-220ENST00000569916 ALDH4A1P30038 563 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 STIP1P31948 543 aaKnown RBP12.85□□□□□ -0.35
CNOT1-220ENST00000569916 ACTN2P35609 894 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 GPR3P46089 330 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 ZFP36L1Q07352 338 aaKnown RBP12.85□□□□□ -0.35
CNOT1-220ENST00000569916 BIRC2Q13490 618 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 MAP9Q49MG5 647 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 LDLRAP1Q5SW96 308 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.85□□□□□ -0.35
CNOT1-220ENST00000569916 GPRC6AQ5T6X5 926 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 IYDQ6PHW0 289 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 IGF2-ASQ6U949 168 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 SLITRK4Q8IW52 837 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 LSMEM2Q8N112 164 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 WDR36Q8NI36 951 aaKnown RBP12.85□□□□□ -0.35
CNOT1-220ENST00000569916 GDAP1Q8TB36 358 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 LRRC45Q96CN5 670 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 TMEM74Q96NL1 305 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 C19orf43Q9BQ61 176 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 NUDT22Q9BRQ3 303 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 TIMM29Q9BSF4 260 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 OSGEPL1Q9H4B0 414 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 RDH14Q9HBH5 336 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 ZFHX4Q86UP3 3567 aa12.85□□□□□ -0.35
CNOT1-220ENST00000569916 CELSR3Q9NYQ7 3312 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 IGHV1OR21-1A0A087WYE8 117 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 KIR2DS5A0A0G2JLQ3 304 aa12.84□□□□□ -0.35
CNOT1-220ENST00000569916 A0A0G2JNG1 304 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms