RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 OXNAD1Q96HP4 312 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 MRFAP1L1Q96HT8 127 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 ZNF830Q96NB3 372 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 PLEKHG4BQ96PX9 1271 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 SLC38A3Q99624 504 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 CTRCQ99895 268 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 SLC12A9Q9BXP2 914 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 ADGRE3Q9BY15 652 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 CARD9Q9H257 536 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 ZFYVE1Q9HBF4 777 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 MAGEE1Q9HCI5 957 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 APMAPQ9HDC9 416 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 ZNF624Q9P2J8 865 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 SLC30A1Q9Y6M5 507 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 HECTD1Q9ULT8 2610 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 COL12A1Q99715 3063 aa13.67□□□□□ -0.22
GTF3C1-211ENST00000569653 B4E171 279 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 LIFP15018 202 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 BRAFP15056 766 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 CD82P27701 267 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 TSPAN7P41732 249 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 ZNF75DP51815 510 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 GFERP55789 205 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 CDK18Q07002 472 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 BIRC2Q13490 618 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 TEX44Q53QW1 395 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 ZNF569Q5MCW4 686 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 TIPARPQ7Z3E1 657 aaKnown RBP13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 C11orf96Q7Z7L8 435 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 FAM129CQ86XR2 697 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 RHOT2Q8IXI1 618 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 RHOT1Q8IXI2 618 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 TRAM1L1Q8N609 369 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 CCHCR1Q8TD31 782 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 GLYATL1Q969I3 302 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 TEKT5Q96M29 485 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 GORASP1Q9BQQ3 440 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 ANP32EQ9BTT0 268 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 DDA1Q9BW61 102 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 SPATA16Q9BXB7 569 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 C10orf88Q9H8K7 445 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 RMI1Q9H9A7 625 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 BPIFA1Q9NP55 256 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 KLC4Q9NSK0 619 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 SIDT1Q9NXL6 827 aaKnown RBP13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 SLC39A1Q9NY26 324 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 CPNE7Q9UBL6 633 aa13.66□□□□□ -0.22
GTF3C1-211ENST00000569653 STMND1H3BQB6 276 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 GAPDHSO14556 408 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 PPP1R12AO14974 1030 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 DUX1O43812 170 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 CST8O60676 142 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 SLC25A14O95258 325 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 NDST3O95803 873 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 NFKB1P19838 968 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 CSTF2P33240 577 aaKnown RBP eCLIP13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 SLC19A1P41440 591 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 MAPK9P45984 424 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 CLCNKAP51800 687 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 SLC14A2Q15849 920 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 ATP13A5Q4VNC0 1218 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 WDR74Q6RFH5 385 aaPredicted RBP13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 SPOCD1Q6ZMY3 1216 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 MICALCLQ6ZW33 695 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 TC2NQ8N9U0 490 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 OR10G6Q8NH81 332 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 NCSTNQ92542 709 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 KRT35Q92764 455 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 RTP4Q96DX8 246 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 TRIM39Q9HCM9 518 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 STARD5Q9NSY2 213 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 KLHL3Q9UH77 587 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 PILRAQ9UKJ1 303 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 DNAJC16Q9Y2G8 782 aa13.65□□□□□ -0.22
GTF3C1-211ENST00000569653 MN1Q10571 1320 aaPredicted RBP13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 SPENQ96T58 3664 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 NBASA2RRP1 2371 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 hCG_1818297A0A087WSY0 165 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 A0A0A6YYK5 440 aaPredicted RBP13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 LOC285095A0A1B0GVY8 99 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 J3QKU1 62 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 RAD1O60671 282 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 ITGB2P05107 769 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 HADHBP55084 474 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 WNT3AP56704 352 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 MC2RQ01718 297 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 NFATC3Q12968 1075 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 PEX6Q13608 980 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 SIRPB2Q5JXA9 342 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 KAZNQ674X7 775 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 XKR5Q6UX68 686 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 ZNF567Q8N184 647 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 HAUS1Q96CS2 278 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 AHCYL2Q96HN2 611 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 MRGPRX2Q96LB1 330 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 ZSCAN5AQ9BUG6 496 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 MAK16Q9BXY0 300 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 GPR63Q9BZJ6 419 aa13.64□□□□□ -0.23
GTF3C1-211ENST00000569653 OSGEPL1Q9H4B0 414 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms