RNA–Protein interactions for RNA: ENST00000569647.1

CNEP1R1-211, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-211ENST00000569647 ATP13A5Q4VNC0 1218 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 DNAJC21Q5F1R6 531 aaKnown RBP12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 MACC1Q6ZN28 852 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 KANSL1Q7Z3B3 1105 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 TMEM135Q86UB9 458 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 PDIK1LQ8N165 341 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 KDF1Q8NAX2 398 aaPredicted RBP12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 LRRC39Q96DD0 335 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 MFSD3Q96ES6 412 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 VPS35Q96QK1 796 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 TRIM56Q9BRZ2 755 aaKnown RBP12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 LGR4Q9BXB1 951 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 FAM129AQ9BZQ8 928 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 PHACTR1Q9C0D0 580 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 FAM114A2Q9NRY5 505 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 SMOXQ9NWM0 555 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 SAMD15Q9P1V8 674 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 FTSJ1Q9UET6 329 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 APPL1Q9UKG1 709 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 APC2O95996 2303 aa12.76□□□□□ -0.37
CNEP1R1-211ENST00000569647 TRBV5-4A0A0C4DH59 114 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 SPTY2D1-AS1A0A0U1RR47 76 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 MAGEB16A2A368 324 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 CCDC162PA2VCL2 907 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 CACNB4O00305 520 aaPredicted RBP12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 INPP4BO15327 924 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 GPR39O43194 453 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 KRT37O76014 449 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 SRP72O76094 671 aaKnown RBP12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 RHOXF2BP0C7M4 288 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 MYCLP1P12525 358 aaPredicted RBP12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 ARNTP27540 789 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 ECHS1P30084 290 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 MC4RP32245 332 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 NFATC2Q13469 925 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 ITGA9Q13797 1035 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 PDE1CQ14123 709 aaPredicted RBP12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 FZD2Q14332 565 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 TEX35Q5T0J7 233 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 CASC4Q6P4E1 433 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 CES3Q6UWW8 571 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 PKD1L2Q7Z442 2459 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 IGDCC3Q8IVU1 814 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 BTN2A2Q8WVV5 523 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 GLYATL1Q969I3 302 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 HDAC10Q969S8 669 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 STAMBPL1Q96FJ0 436 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 SGSM3Q96HU1 749 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 HIC2Q96JB3 615 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 EBNA1BP2Q99848 306 aaKnown RBP12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 RHOXF2Q9BQY4 288 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 SUDS3Q9H7L9 328 aaPredicted RBP12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 PLAC1Q9HBJ0 212 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 PHPT1Q9NRX4 125 aaPredicted RBP12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 TEX264Q9Y6I9 313 aa12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 SMG1Q96Q15 3661 aaKnown RBP12.75□□□□□ -0.37
CNEP1R1-211ENST00000569647 ASXL3Q9C0F0 2248 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 ZCWPW2A0A1B0GU75 182 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 TMEM8BA6NDV4 472 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 TMEM202A6NGA9 273 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 OR51F1A6NGY5 319 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 EIF3HO15372 352 aaKnown RBP eCLIP12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 UGT1A9O60656 530 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 SDC3O75056 442 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 USP1O94782 785 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 LDOC1O95751 146 aaPredicted RBP12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 PGAM1P18669 254 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 UGT1A6P19224 532 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 UGT1A1P22309 533 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 UGT1A4P22310 534 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 FOXN2P32314 431 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 UGT1A3P35503 534 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 UGT1A5P35504 534 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 ELK3P41970 407 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 ARCN1P48444 511 aaKnown RBP12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 CARSP49589 748 aaKnown RBP12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 THOP1P52888 689 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 PDIA2Q13087 525 aaKnown RBP12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 PTK2BQ14289 1009 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 FASTKD3Q14CZ7 662 aaKnown RBP12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 ANKRD20A4Q4UJ75 823 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 KIAA0930Q6ICG6 404 aaPredicted RBP12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 AFTPHQ6ULP2 937 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 CCNI2Q6ZMN8 369 aaPredicted RBP12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 SNX20Q7Z614 316 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 TRIM74Q86UV6 250 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 PHYKPLQ8IUZ5 450 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 EID2Q8N6I1 236 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 ZNF398Q8TD17 642 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 ZNF669Q96BR6 464 aaPredicted RBP12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 CNDP2Q96KP4 475 aaKnown RBP12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 WDR92Q96MX6 357 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 FCRL3Q96P31 734 aaPredicted RBP12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 NAT9Q9BTE0 207 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 FOXP3Q9BZS1 431 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 ASB8Q9H765 288 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 UGT1A7Q9HAW7 530 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 UGT1A10Q9HAW8 530 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 UGT1A8Q9HAW9 530 aa12.74□□□□□ -0.37
CNEP1R1-211ENST00000569647 FGF22Q9HCT0 170 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms