RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 TMEM192Q8IY95 271 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 VWA5B2Q8N398 1253 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 SMARCD1Q96GM5 515 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 CPB2Q96IY4 423 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 SPON2Q9BUD6 331 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 OXCT2Q9BYC2 517 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-216ENST00000569240 CCM2LQ9NUG4 571 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-216ENST00000569240 SETD4Q9NVD3 440 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 PDP1Q9P0J1 537 aaPredicted RBP7.07□□□□□ -1.28
CNOT1-216ENST00000569240 NUFIP1Q9UHK0 495 aaKnown RBP7.07□□□□□ -1.28
CNOT1-216ENST00000569240 FBXO5Q9UKT4 447 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 MINPP1Q9UNW1 487 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 E2F8A0AVK6 867 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 NAP1L6A6NFF2 107 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 M0QYT0 321 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 TRUB2O95900 331 aaKnown RBP7.07□□□□□ -1.28
CNOT1-216ENST00000569240 JCHAINP01591 159 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 PTPN2P17706 415 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 CD6P30203 668 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 ABL2P42684 1182 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 ARFIP1P53367 373 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 NOMO3P69849 1222 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 RAB39AQ14964 217 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 VEPH1Q14D04 833 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 OLFML2AQ68BL7 652 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 AHSA2Q719I0 299 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 GALNT7Q86SF2 657 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 TOMM5Q8N4H5 51 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 SLC4A9Q96Q91 983 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 MRI1Q9BV20 369 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 TMEM134Q9H6X4 195 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 SPHKAPQ2M3C7 1700 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 RRN3P2A6NIE6 340 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 OR2AT4A6NND4 320 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 DISC1C4P0D8 188 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 PGLSO95336 258 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 GH2P01242 217 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 LHX1P48742 406 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 GTF2BQ00403 316 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 RGS1Q08116 209 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 ANKRD22Q5VYY1 191 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 TPD52L3Q96J77 140 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 ACOX2Q99424 681 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 TSNAXQ99598 290 aaKnown RBP7.07□□□□□ -1.28
CNOT1-216ENST00000569240 RIOK2Q9BVS4 552 aaKnown RBP7.07□□□□□ -1.28
CNOT1-216ENST00000569240 TMEM184CQ9NVA4 438 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 CALML5Q9NZT1 146 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 SIRPGQ9P1W8 387 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 OGDHLQ9ULD0 1010 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 PCDHGB5Q9Y5G0 923 aa7.07□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF487B1APH4 448 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 NT5C1B-RDH14C9J2C7 533 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 EI24O14681 340 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 GMDSO60547 372 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 KERAO60938 352 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 RPS3P23396 243 aaKnown RBP eCLIP7.06□□□□□ -1.283e-8■□□□□ 9.6
CNOT1-216ENST00000569240 GNPDA1P46926 289 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 OSTNP61366 133 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SRSF11Q05519 484 aaKnown RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ARHGAP15Q53QZ3 475 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF621Q6ZSS3 439 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SPPL2CQ8IUH8 684 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 DCAKDQ8WVC6 231 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 DNAJC19Q96DA6 116 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ZBED3Q96IU2 234 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SPATA9Q9BWV2 254 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 FAM49AQ9H0Q0 323 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ZFP57Q9NU63 452 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 A0A088AWK7 358 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 TSTD3H0UI37 97 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 RFXANKO14593 260 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 IFNA17P01571 189 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 IFNA6P05013 189 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CCNYL3P0C7X3 344 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ZNF10P21506 573 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CXCR4P61073 352 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ATP13A4Q4VNC1 1196 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 OVOS1Q6IE37 1185 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 C15orf52Q6ZUT6 534 aaKnown RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 THAP6Q8TBB0 222 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CPT1BQ92523 772 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SLC7A6OSQ96CW6 309 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 MSANTD3Q96H12 275 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 RADILQ96JH8 1075 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 BTF3L4Q96K17 158 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 FAIM2Q9BWQ8 316 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 APOL5Q9BWW9 433 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 ATP13A3Q9H7F0 1226 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 B3GNT2Q9NY97 397 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 NUDT4Q9NZJ9 180 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SFMBT1Q9UHJ3 866 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 POLR3HQ9Y535 204 aaPredicted RBP7.06□□□□□ -1.28
CNOT1-216ENST00000569240 TNFRSF11BO00300 401 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 LYPLA2O95372 231 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SLC6A2P23975 617 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 NOS3P29474 1203 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 HTR2BP41595 481 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SPIBQ01892 262 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 SLC3A1Q07837 685 aa7.06□□□□□ -1.28
CNOT1-216ENST00000569240 CAMK2GQ13555 558 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms