RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 HACD3Q9P035 362 aa14.28□□□□□ -0.12
CMTM3-215ENST00000568477 RSPH14Q9UHP6 348 aa14.28□□□□□ -0.12
CMTM3-215ENST00000568477 EFR3BQ9Y2G0 817 aa14.28□□□□□ -0.12
CMTM3-215ENST00000568477 IGHV1OR21-1A0A087WYE8 117 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 AGRPO00253 132 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 AURKAO14965 403 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 SNX2O60749 519 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 EML2O95834 649 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 HLA-DPA1P20036 260 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 RBL1P28749 1068 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 SLC5A2P31639 672 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 HMGCLP35914 325 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 CHRNA4P43681 627 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 PPM1FP49593 454 aaPredicted RBP14.27□□□□□ -0.13
CMTM3-215ENST00000568477 GPLD1P80108 840 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 OTUD4Q01804 1114 aaKnown RBP14.27□□□□□ -0.13
CMTM3-215ENST00000568477 ZNF648Q5T619 568 aaPredicted RBP14.27□□□□□ -0.13
CMTM3-215ENST00000568477 ITPRIPL1Q6GPH6 555 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 ADGRG6Q86SQ4 1221 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 TXLNBQ8N3L3 684 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 ACTL9Q8TC94 416 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 SLC38A3Q99624 504 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 DPYSL5Q9BPU6 564 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 FSD1LQ9BXM9 530 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 ZMYND15Q9H091 742 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 GBA3Q9H227 469 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 BPIFA1Q9NP55 256 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 TBC1D29Q9UFV1 150 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 ADGRG1Q9Y653 693 aa14.27□□□□□ -0.13
CMTM3-215ENST00000568477 KIR2DS5A0A0G2JLQ3 304 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 A0A0G2JNG1 304 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 IGHV5-10-1A0A0J9YXX1 117 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 TEX51A0A1B0GUA7 166 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 GRID2IPA4D2P6 1211 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 A6NCN8 305 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 EIF4E1BA6NMX2 242 aaKnown RBP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 KIR2DS3K7RE56 304 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 HGSO14964 777 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 NVLO15381 856 aaKnown RBP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 VEGFDO43915 354 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 ANXA9O76027 345 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 STK10O94804 968 aaKnown RBP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 ITIH1P19827 911 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 CLCNKAP51800 687 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 GEMP55040 296 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 EIF3EP60228 445 aaKnown RBP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 HHEXQ03014 270 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 SQSTM1Q13501 440 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 TRA2AQ13595 282 aaKnown RBP eCLIP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 KIR2DS5Q14953 304 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 C16orf72Q14CZ0 275 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 SLC1A5Q15758 541 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 NKAIN2Q5VXU1 208 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 ZDHHC20Q5W0Z9 365 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 IYDQ6PHW0 289 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 CRTC3Q6UUV7 619 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 ZNF574Q6ZN55 896 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 ZNF761Q86XN6 746 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 C17orf53Q8N3J3 647 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 TTC30BQ8N4P2 665 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 LRRC57Q8N9N7 239 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 OR4D9Q8NGE8 314 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 OR10G6Q8NH81 332 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 BLOC1S5Q8TDH9 187 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 SH3KBP1Q96B97 665 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 AHCYL2Q96HN2 611 aaKnown RBP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 CCDC74BQ96LY2 380 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 BBC3Q96PG8 261 aaPredicted RBP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 VPS35Q96QK1 796 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 OSGEPL1Q9H4B0 414 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 C10orf88Q9H8K7 445 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 CPNE5Q9HCH3 593 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 SARS2Q9NP81 518 aaKnown RBP14.26□□□□□ -0.13
CMTM3-215ENST00000568477 KLC4Q9NSK0 619 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 ACSL6Q9UKU0 697 aa14.26□□□□□ -0.13
CMTM3-215ENST00000568477 BPTFQ12830 3046 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 OR5K4A6NMS3 321 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 CHUKO15111 745 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 KMOO15229 486 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 DUX1O43812 170 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 TJP3O95049 919 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 RBP3P10745 1247 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 F3P13726 295 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 CSF2RBP32927 897 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 SPAM1P38567 509 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 ETV5P41161 510 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 LIMK2P53671 638 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 MAPK10P53779 464 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 KIF5AQ12840 1032 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 CLN3Q13286 438 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 NFATC2Q13469 925 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 GTF2H3Q13889 308 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 INSCQ1MX18 579 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 ATP13A5Q4VNC0 1218 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 ARHGAP40Q5TG30 622 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 DARS2Q6PI48 645 aaKnown RBP14.25□□□□□ -0.13
CMTM3-215ENST00000568477 PEX26Q7Z412 305 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 GLT6D1Q7Z4J2 308 aa14.25□□□□□ -0.13
CMTM3-215ENST00000568477 SLC9B2Q86UD5 537 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms