RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 SERPINA4P29622 427 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 HLA-FP30511 346 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 PPARGP37231 505 aaPredicted RBP23.09■■□□□ 1.29
LINC00543-201ENST00000567234 KCNC1P48547 511 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 CDKN1CP49918 316 aaPredicted RBP23.09■■□□□ 1.29
LINC00543-201ENST00000567234 HERVK_113P63132 956 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 DGKKQ5KSL6 1271 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 TMEM126BQ8IUX1 230 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 PANX3Q96QZ0 392 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 ERVK-6Q9BXR3 956 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 CEP44Q9C0F1 390 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 KLHL4Q9C0H6 718 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 ZFYVE1Q9HBF4 777 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 CYP4F12Q9HCS2 524 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 DNAAF2Q9NVR5 837 aaKnown RBP23.09■■□□□ 1.29
LINC00543-201ENST00000567234 ATG2AQ2TAZ0 1938 aa23.09■■□□□ 1.29
LINC00543-201ENST00000567234 CCNT2O60583 730 aaKnown RBP23.08■■□□□ 1.29
LINC00543-201ENST00000567234 ZCCHC18P0CG32 403 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 CTPS1P17812 591 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 CPA2P48052 419 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 DMC1Q14565 340 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 ZNF678Q5SXM1 525 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 PAQR3Q6TCH7 311 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 CPSF7Q8N684 471 aaKnown RBP23.08■■□□□ 1.29
LINC00543-201ENST00000567234 STAG3L4Q8TBR4 150 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 KCNJ9Q92806 393 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 EID2BQ96D98 161 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 OTUB2Q96DC9 234 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 PHF21BQ96EK2 531 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 MAELQ96JY0 434 aaKnown RBP23.08■■□□□ 1.29
LINC00543-201ENST00000567234 LYSMD1Q96S90 227 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 ATOH8Q96SQ7 321 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 NUF2Q9BZD4 464 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 GSTO2Q9H4Y5 243 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 THEGQ9P2T0 379 aa23.08■■□□□ 1.29
LINC00543-201ENST00000567234 CAPN8A6NHC0 703 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 E9PBE3 544 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 KLHL41O60662 606 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 KERAO60938 352 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 PRAMEF12O95522 483 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 COPAP53621 1224 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 LSM12Q3MHD2 195 aaKnown RBP23.08■■□□□ 1.28
LINC00543-201ENST00000567234 PRSS36Q5K4E3 855 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 C1orf146Q5VVC0 180 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 BORAQ6PGQ7 559 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 RAB44Q7Z6P3 723 aaPredicted RBP23.08■■□□□ 1.28
LINC00543-201ENST00000567234 TMEM25Q86YD3 366 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 OR6K2Q8NGY2 324 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 GRIN3AQ8TCU5 1115 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 IRF7Q92985 503 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 Q9H521 79 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 MRGBPQ9NV56 204 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 SLC7A8Q9UHI5 535 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 DPP7Q9UHL4 492 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 SLC25A13Q9UJS0 675 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 APPL1Q9UKG1 709 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 MTF2Q9Y483 593 aaPredicted RBP23.08■■□□□ 1.28
LINC00543-201ENST00000567234 PCDHB1Q9Y5F3 818 aa23.08■■□□□ 1.28
LINC00543-201ENST00000567234 GOLGA8CPA6NN73 597 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 DCXO43602 365 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 RNASEH1O60930 286 aaKnown RBP23.07■■□□□ 1.28
LINC00543-201ENST00000567234 CLASP2O75122 1294 aaKnown RBP23.07■■□□□ 1.28
LINC00543-201ENST00000567234 ALPIP09923 528 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 RPL5P46777 297 aaKnown RBP23.07■■□□□ 1.28
LINC00543-201ENST00000567234 CHN2P52757 468 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 NAA20P61599 178 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 PTPRRQ15256 657 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 ZNF77Q15935 545 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 ADRM1Q16186 407 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 CDKN3Q16667 212 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 FUT11Q495W5 492 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 PDE12Q6L8Q7 609 aaKnown RBP23.07■■□□□ 1.28
LINC00543-201ENST00000567234 UGT3A1Q6NUS8 523 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 B3GNT6Q6ZMB0 384 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 CBARPQ8N350 705 aaPredicted RBP23.07■■□□□ 1.28
LINC00543-201ENST00000567234 PCDH20Q8N6Y1 951 aaKnown RBP23.07■■□□□ 1.28
LINC00543-201ENST00000567234 RIN3Q8TB24 985 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 TTC1Q99614 292 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 GPR21Q99679 349 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 CPEB1Q9BZB8 566 aaKnown RBP23.07■■□□□ 1.28
LINC00543-201ENST00000567234 NKX2-4Q9H2Z4 354 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 WDR55Q9H6Y2 383 aaPredicted RBP23.07■■□□□ 1.28
LINC00543-201ENST00000567234 GTSE1Q9NYZ3 720 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 FAM50BQ9Y247 325 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 PPIL1Q9Y3C6 166 aa23.07■■□□□ 1.28
LINC00543-201ENST00000567234 HNRNPLP14866 589 aaKnown RBP eCLIP23.06■■□□□ 1.28
LINC00543-201ENST00000567234 PTPN5P54829 565 aa23.06■■□□□ 1.28
LINC00543-201ENST00000567234 KLF10Q13118 480 aa23.06■■□□□ 1.28
LINC00543-201ENST00000567234 OR4D1Q15615 310 aa23.06■■□□□ 1.28
LINC00543-201ENST00000567234 MYLK3Q32MK0 819 aa23.06■■□□□ 1.28
LINC00543-201ENST00000567234 CTSL3PQ5NE16 218 aa23.06■■□□□ 1.28
LINC00543-201ENST00000567234 C22orf39Q6P5X5 142 aa23.06■■□□□ 1.28
LINC00543-201ENST00000567234 TAS2R42Q7RTR8 314 aa23.06■■□□□ 1.28
LINC00543-201ENST00000567234 CUZD1Q86UP6 607 aa23.06■■□□□ 1.28
LINC00543-201ENST00000567234 SHCBP1LQ9BZQ2 653 aa23.06■■□□□ 1.28
LINC00543-201ENST00000567234 P2RY12Q9H244 342 aa23.06■■□□□ 1.28
LINC00543-201ENST00000567234 TNKS2Q9H2K2 1166 aa23.06■■□□□ 1.28
LINC00543-201ENST00000567234 SPHK2Q9NRA0 654 aa23.06■■□□□ 1.28
LINC00543-201ENST00000567234 TRMT6Q9UJA5 497 aaKnown RBP23.06■■□□□ 1.28
LINC00543-201ENST00000567234 SYCE1LA8MT33 242 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms