RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 SPA17Q15506 151 aa19.93■□□□□ 0.78
CLN6-207ENST00000566347 WDR74Q6RFH5 385 aaPredicted RBP19.93■□□□□ 0.78
CLN6-207ENST00000566347 ZNF761Q86XN6 746 aaPredicted RBP19.93■□□□□ 0.78
CLN6-207ENST00000566347 SGF29Q96ES7 293 aa19.93■□□□□ 0.78
CLN6-207ENST00000566347 PLEKHG4BQ96PX9 1271 aa19.93■□□□□ 0.78
CLN6-207ENST00000566347 VAT1Q99536 393 aa19.93■□□□□ 0.78
CLN6-207ENST00000566347 EPB41L1Q9H4G0 881 aa19.93■□□□□ 0.78
CLN6-207ENST00000566347 TRABDQ9H4I3 376 aa19.93■□□□□ 0.78
CLN6-207ENST00000566347 hCG_1818297A0A087WSY0 165 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 CHUKO15111 745 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 EPOP01588 193 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 BPIP17213 487 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 MPSTP25325 297 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 CYLC1P35663 651 aaPredicted RBP19.92■□□□□ 0.78
CLN6-207ENST00000566347 NFATC2Q13469 925 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 C11orf63Q6NUN7 778 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 ADGRG6Q86SQ4 1221 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 CCDC50Q8IVM0 306 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 ZSCAN1Q8NBB4 408 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 RBM41Q96IZ5 413 aaKnown RBP19.92■□□□□ 0.78
CLN6-207ENST00000566347 DDA1Q9BW61 102 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 ASPSCR1Q9BZE9 553 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 ARFGAP3Q9NP61 516 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 KLC4Q9NSK0 619 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 UBP1Q9NZI7 540 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 TMEM9Q9P0T7 183 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 KLHL8Q9P2G9 620 aaPredicted RBP19.92■□□□□ 0.78
CLN6-207ENST00000566347 CPNE7Q9UBL6 633 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 PCDHA13Q9Y5I0 950 aa19.92■□□□□ 0.78
CLN6-207ENST00000566347 PIEZO2Q9H5I5 2752 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 ZNF462Q96JM2 2506 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 LOC285095A0A1B0GVY8 99 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 HACD1B0YJ81 288 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 B4E171 279 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 KMOO15229 486 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 VEGFDO43915 354 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 NFKB1P19838 968 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 CD68P34810 354 aaPredicted RBP19.91■□□□□ 0.78
CLN6-207ENST00000566347 HMGCLP35914 325 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 TSPAN7P41732 249 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 WNT3AP56704 352 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 RAB15P59190 212 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 LLGL1Q15334 1064 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 PPP2R5EQ16537 467 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 ZNF648Q5T619 568 aaPredicted RBP19.91■□□□□ 0.78
CLN6-207ENST00000566347 ZDHHC20Q5W0Z9 365 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 ZNF605Q86T29 641 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 LRRTM4Q86VH4 590 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 ZC3H18Q86VM9 953 aaKnown RBP19.91■□□□□ 0.78
CLN6-207ENST00000566347 ART4Q93070 314 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 VPS35Q96QK1 796 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 GOLPH3Q9H4A6 298 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 OSGEPL1Q9H4B0 414 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 SLC39A1Q9NY26 324 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 SPO11Q9Y5K1 396 aa19.91■□□□□ 0.78
CLN6-207ENST00000566347 SDK2Q58EX2 2172 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 ATP1A2P50993 1020 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 ADCY2Q08462 1091 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 LY6DQ14210 128 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 INSCQ1MX18 579 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 CRTC3Q6UUV7 619 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 KDELC1Q6UW63 502 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 VASH2Q86V25 355 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 FAM129CQ86XR2 697 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 HTR3CQ8WXA8 447 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 NCSTNQ92542 709 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 MED8Q96G25 268 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 CALR3Q96L12 384 aaKnown RBP19.9■□□□□ 0.78
CLN6-207ENST00000566347 QKIQ96PU8 341 aaKnown RBP eCLIP19.9■□□□□ 0.78
CLN6-207ENST00000566347 FCRL5Q96RD9 977 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 TIMM29Q9BSF4 260 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 UCK1Q9HA47 277 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 PRDM8Q9NQV8 689 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.9■□□□□ 0.78
CLN6-207ENST00000566347 HACD3Q9P035 362 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 TRHDEQ9UKU6 1024 aa19.9■□□□□ 0.78
CLN6-207ENST00000566347 LILRA5A6NI73 299 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 EFCAB7A8K855 629 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 AURKAO14965 403 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 CDK14O94921 469 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 ITGB2P05107 769 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 ZNF7P17097 686 aaPredicted RBP19.89■□□□□ 0.77
CLN6-207ENST00000566347 MARCKSL1P49006 195 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 SRSF6Q13247 344 aaKnown RBP19.89■□□□□ 0.77
CLN6-207ENST00000566347 MPP3Q13368 585 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 SIRPB2Q5JXA9 342 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 DCAF12Q5T6F0 453 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 XKR5Q6UX68 686 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 BBS12Q6ZW61 710 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 PID1Q7Z2X4 250 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 ARHGAP22Q7Z5H3 698 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 DAAM2Q86T65 1068 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 ZNF567Q8N184 647 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 DTX3LQ8TDB6 740 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 HAUS1Q96CS2 278 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 TEFMQ96QE5 360 aaKnown RBP19.89■□□□□ 0.77
CLN6-207ENST00000566347 BPIFA1Q9NP55 256 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 PCDHGA4Q9Y5G9 962 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 B3GALT1Q9Y5Z6 326 aa19.89■□□□□ 0.77
CLN6-207ENST00000566347 APOC4-APOC2K7ER74 178 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms