RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 MED8Q96G25 268 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 ZMYND15Q9H091 742 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 PRDM8Q9NQV8 689 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 RAD18Q9NS91 495 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 KLC4Q9NSK0 619 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 SLC23A2Q9UGH3 650 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 TMPRSS11EQ9UL52 423 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 TFR2Q9UP52 801 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 PCDHGA4Q9Y5G9 962 aa18.09■□□□□ 0.49
USB1-213ENST00000566292 KIR2DS5A0A0G2JLQ3 304 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 A0A0G2JNG1 304 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 EFCAB7A8K855 629 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 STMND1H3BQB6 276 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 KIR2DS3K7RE56 304 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 MTX2O75431 263 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 SLC2A4P14672 509 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 NFKB1P19838 968 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 MARCKSL1P49006 195 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 PPM1FP49593 454 aaPredicted RBP18.08■□□□□ 0.48
USB1-213ENST00000566292 KIR2DS5Q14953 304 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 KHDC1Q4VXA5 237 aaKnown RBP18.08■□□□□ 0.48
USB1-213ENST00000566292 SNAP47Q5SQN1 464 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 PDPK2PQ6A1A2 396 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 WDR74Q6RFH5 385 aaPredicted RBP18.08■□□□□ 0.48
USB1-213ENST00000566292 KDELC1Q6UW63 502 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 BZW1Q7L1Q6 419 aaKnown RBP18.08■□□□□ 0.48
USB1-213ENST00000566292 ARHGAP22Q7Z5H3 698 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 PHYKPLQ8IUZ5 450 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 BMPERQ8N8U9 685 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 EXD3Q8N9H8 876 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 ANP32EQ9BTT0 268 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 DDA1Q9BW61 102 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 TBC1D10AQ9BXI6 508 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 STN1Q9H668 368 aaKnown RBP18.08■□□□□ 0.48
USB1-213ENST00000566292 BPIFA1Q9NP55 256 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 SCHIP1Q9P0W5 487 aaPredicted RBP18.08■□□□□ 0.48
USB1-213ENST00000566292 CPNE7Q9UBL6 633 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 TENM4Q6N022 2769 aa18.08■□□□□ 0.48
USB1-213ENST00000566292 hCG_1818297A0A087WSY0 165 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 LOC285095A0A1B0GVY8 99 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 PRR19A6NJB7 356 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 OR5K4A6NMS3 321 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 A8MU76 341 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 B4E171 279 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 GPR89AB7ZAQ6 455 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 LCA5LO95447 670 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 GPR89BP0CG08 455 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 TSPAN7P41732 249 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 EPHA4P54764 986 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 WNT3AP56704 352 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 UBE2IP63279 158 aaKnown RBP18.07■□□□□ 0.48
USB1-213ENST00000566292 PLA2G4EQ3MJ16 856 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 TFDP3Q5H9I0 405 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 CCDC70Q6NSX1 233 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 SARM1Q6SZW1 724 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 FAM129CQ86XR2 697 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 KATNAL2Q8IYT4 538 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 HTR3CQ8WXA8 447 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 NCSTNQ92542 709 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 EXTL1Q92935 676 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 NKD1Q969G9 470 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 SH3KBP1Q96B97 665 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 HAUS1Q96CS2 278 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 PLEKHG4BQ96PX9 1271 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 OSGEPL1Q9H4B0 414 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 SLC39A1Q9NY26 324 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 FAM153AQ9UHL3 310 aa18.07■□□□□ 0.48
USB1-213ENST00000566292 F5H423 210 aaPredicted RBP18.06■□□□□ 0.48
USB1-213ENST00000566292 ZIC2O95409 532 aaPredicted RBP18.06■□□□□ 0.48
USB1-213ENST00000566292 ZNF7P17097 686 aaPredicted RBP18.06■□□□□ 0.48
USB1-213ENST00000566292 UGT1A3P35503 534 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 MAPK9P45984 424 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 INSCQ1MX18 579 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 ATP13A5Q4VNC0 1218 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 SIRPB2Q5JXA9 342 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 ANKS6Q68DC2 871 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 LRRTM4Q86VH4 590 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 ZC3H18Q86VM9 953 aaKnown RBP18.06■□□□□ 0.48
USB1-213ENST00000566292 ZNF547Q8IVP9 402 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 ZNF567Q8N184 647 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 TTC30BQ8N4P2 665 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 CCDC112Q8NEF3 446 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 P3H4Q92791 437 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 OXNAD1Q96HP4 312 aaPredicted RBP18.06■□□□□ 0.48
USB1-213ENST00000566292 MRGPRX2Q96LB1 330 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 SRPK1Q96SB4 655 aaKnown RBP18.06■□□□□ 0.48
USB1-213ENST00000566292 PCDHA13Q9Y5I0 950 aa18.06■□□□□ 0.48
USB1-213ENST00000566292 LILRA5A6NI73 299 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 KMOO15229 486 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 VEGFDO43915 354 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 ZRANB2O95218 330 aaKnown RBP eCLIP18.05■□□□□ 0.48
USB1-213ENST00000566292 ITGB2P05107 769 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 XRCC1P18887 633 aaPredicted RBP18.05■□□□□ 0.48
USB1-213ENST00000566292 HMGCLP35914 325 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 CHRNA4P43681 627 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 RAB15P59190 212 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 CYP4F2P78329 520 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 SLC25A41Q8N5S1 370 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 KRT35Q92764 455 aa18.05■□□□□ 0.48
USB1-213ENST00000566292 QKIQ96PU8 341 aaKnown RBP eCLIP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms