RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 TBC1D3GQ6DHY5 549 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 PTRHD1Q6GMV3 140 aaKnown RBP18.57■□□□□ 0.56
COMMD4-213ENST00000565834 RAET1GQ6H3X3 334 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TBC1D3CQ6IPX1 549 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 CDHR3Q6ZTQ4 885 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 TBC1D3Q8IZP1 549 aaPredicted RBP18.57■□□□□ 0.56
COMMD4-213ENST00000565834 DDHD1Q8NEL9 900 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 BTN2A2Q8WVV5 523 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 GLYATL1Q969I3 302 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 KDM4CQ9H3R0 1056 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 GPAMQ9HCL2 828 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 CD93Q9NPY3 652 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 INTS9Q9NV88 658 aaKnown RBP18.57■□□□□ 0.56
COMMD4-213ENST00000565834 C2orf42Q9NWW7 574 aa18.57■□□□□ 0.56
COMMD4-213ENST00000565834 ZFR2Q9UPR6 939 aaKnown RBP18.57■□□□□ 0.56
COMMD4-213ENST00000565834 A0A087X1B8 175 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 A0A1W2PQU0 124 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 CFAP99D6REC4 459 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 RNGTTO60942 597 aaKnown RBP18.56■□□□□ 0.56
COMMD4-213ENST00000565834 VPS26AO75436 327 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 GSTA1P08263 222 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 IRF9Q00978 393 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 AGERQ15109 404 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 LDLRAP1Q5SW96 308 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 ANO7Q6IWH7 933 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 NEK5Q6P3R8 708 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 CCDC91Q7Z6B0 441 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 PIM3Q86V86 326 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 DENND1AQ8TEH3 1009 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 CLDN23Q96B33 292 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 DCUN1D1Q96GG9 259 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 TSNARE1Q96NA8 513 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 HHIPQ96QV1 700 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 CHRDQ9H2X0 955 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 POPDC3Q9HBV1 291 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 ITM2CQ9NQX7 267 aa18.56■□□□□ 0.56
COMMD4-213ENST00000565834 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-213ENST00000565834 USP36Q9P275 1121 aaKnown RBP18.56■□□□□ 0.56
COMMD4-213ENST00000565834 E5RI56 91 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 H3BMM5 538 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 K7ESM1 405 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 NIPSNAP2O75323 286 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 TOP3BO95985 862 aaKnown RBP18.55■□□□□ 0.56
COMMD4-213ENST00000565834 SOD1P00441 154 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 PYGLP06737 847 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 RALBP11234 206 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 COL6A2P12110 1019 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 GMPRP36959 345 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 ZXDAP98168 799 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 B4GALNT1Q00973 533 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 TIAL1Q01085 375 aaKnown RBP eCLIP18.55■□□□□ 0.56
COMMD4-213ENST00000565834 SGCGQ13326 291 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 PDAP1Q13442 181 aaKnown RBP18.55■□□□□ 0.56
COMMD4-213ENST00000565834 INSCQ1MX18 579 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 TMEM259Q4ZIN3 620 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 CLEC14AQ86T13 490 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 TBC1D1Q86TI0 1168 aaPredicted RBP18.55■□□□□ 0.56
COMMD4-213ENST00000565834 HORMAD1Q86X24 394 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 PHYKPLQ8IUZ5 450 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 PELI3Q8N2H9 469 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 CLDN19Q8N6F1 224 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 HEXDCQ8WVB3 486 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 KCNJ9Q92806 393 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 FAM136AQ96C01 138 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 C1QTNF2Q9BXJ5 285 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 BTBD1Q9H0C5 482 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 MLXIPLQ9NP71 852 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 SLC17A7Q9P2U7 560 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 EBF1Q9UH73 591 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 ADAM21Q9UKJ8 722 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 GRID1Q9ULK0 1009 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 PLLPQ9Y342 182 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 PRSS21Q9Y6M0 314 aa18.55■□□□□ 0.56
COMMD4-213ENST00000565834 INPP4BO15327 924 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 SLC25A14O95258 325 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-213ENST00000565834 CHRM3P20309 590 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 MSH3P20585 1137 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 CD9P21926 228 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 MDH1P40925 334 aaKnown RBP18.54■□□□□ 0.56
COMMD4-213ENST00000565834 RPS9P46781 194 aaKnown RBP18.54■□□□□ 0.56
COMMD4-213ENST00000565834 LRRC14Q15048 493 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 MAP7D1Q3KQU3 841 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 MACC1Q6ZN28 852 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 LCA5Q86VQ0 697 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 PLD6Q8N2A8 252 aaKnown RBP18.54■□□□□ 0.56
COMMD4-213ENST00000565834 SPEM1Q8N4L4 309 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 FAM111AQ96PZ2 611 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 GPR21Q99679 349 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 C1QTNF7Q9BXJ2 289 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 C12orf65Q9H3J6 166 aaKnown RBP18.54■□□□□ 0.56
COMMD4-213ENST00000565834 SGK2Q9HBY8 427 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 MED16Q9Y2X0 877 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 SIT1Q9Y3P8 196 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 LRRC72A6NJI9 287 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 DNAJC6O75061 913 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 ATP1B2P14415 290 aaPredicted RBP18.54■□□□□ 0.56
COMMD4-213ENST00000565834 ACSL1P33121 698 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 CBX1P83916 185 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 GUCY1A3Q02108 690 aa18.54■□□□□ 0.56
COMMD4-213ENST00000565834 FGL2Q14314 439 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms