RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 PTPRCAPQ14761 206 aa25.71■■□□□ 1.71
NME3-208ENST00000565379 AFTPHQ6ULP2 937 aa25.71■■□□□ 1.71
NME3-208ENST00000565379 FAM151BQ6UXP7 276 aa25.71■■□□□ 1.71
NME3-208ENST00000565379 KDM7AQ6ZMT4 941 aa25.71■■□□□ 1.71
NME3-208ENST00000565379 SNX20Q7Z614 316 aa25.71■■□□□ 1.71
NME3-208ENST00000565379 MPP5Q8N3R9 675 aa25.71■■□□□ 1.71
NME3-208ENST00000565379 ZNF398Q8TD17 642 aa25.71■■□□□ 1.71
NME3-208ENST00000565379 ULK4Q96C45 1275 aa25.71■■□□□ 1.71
NME3-208ENST00000565379 HIC2Q96JB3 615 aa25.71■■□□□ 1.71
NME3-208ENST00000565379 CDC6Q99741 560 aa25.71■■□□□ 1.71
NME3-208ENST00000565379 ZDHHC18Q9NUE0 388 aa25.71■■□□□ 1.71
NME3-208ENST00000565379 K7ESM1 405 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 SDC3O75056 442 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 DKK1O94907 266 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 CAPNS1P04632 268 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 MC4RP32245 332 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 CLDN6P56747 220 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 PDIA2Q13087 525 aaKnown RBP25.7■■□□□ 1.7
NME3-208ENST00000565379 NFATC4Q14934 902 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 TRADDQ15628 312 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 CHRNA6Q15825 494 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 MSS51Q4VC12 460 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 KIAA0930Q6ICG6 404 aaPredicted RBP25.7■■□□□ 1.7
NME3-208ENST00000565379 HEATR4Q86WZ0 1026 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 OR13H1Q8NG92 308 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 BTN2A2Q8WVV5 523 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 IFT81Q8WYA0 676 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 TBATAQ96M53 351 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 AGAP2Q99490 1192 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 TEX264Q9Y6I9 313 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 RPS6KL1Q9Y6S9 549 aa25.7■■□□□ 1.7
NME3-208ENST00000565379 ANKRD11Q6UB99 2663 aaPredicted RBP25.7■■□□□ 1.7
NME3-208ENST00000565379 DSPP15924 2871 aaKnown RBP25.7■■□□□ 1.7
NME3-208ENST00000565379 AGAP14A8MT82 685 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 GAPDHSO14556 408 aaPredicted RBP25.69■■□□□ 1.7
NME3-208ENST00000565379 NMBRP28336 390 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 CACNG1Q06432 222 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 NFATC2Q13469 925 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 PEX6Q13608 980 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 HLTFQ14527 1009 aaKnown RBP eCLIP25.69■■□□□ 1.7
NME3-208ENST00000565379 ANKRD20A4Q4UJ75 823 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 MACC1Q6ZN28 852 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 KANSL1Q7Z3B3 1105 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 PHYKPLQ8IUZ5 450 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 AGGF1Q8N302 714 aaeCLIP25.69■■□□□ 1.7
NME3-208ENST00000565379 OXR1Q8N573 874 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 EID2Q8N6I1 236 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 GLYATL1Q969I3 302 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 HDAC10Q969S8 669 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 TBRG4Q969Z0 631 aaKnown RBP eCLIP25.69■■□□□ 1.7
NME3-208ENST00000565379 FUBP1Q96AE4 644 aaKnown RBP25.69■■□□□ 1.7
NME3-208ENST00000565379 MFSD3Q96ES6 412 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 COX14Q96I36 57 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 ZNF778Q96MU6 729 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 TTC1Q99614 292 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 ASB8Q9H765 288 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 ERVMER34-1Q9H9K5 563 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 SLC2A6Q9UGQ3 507 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 OR1A2Q9Y585 309 aa25.69■■□□□ 1.7
NME3-208ENST00000565379 APC2O95996 2303 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 SCN8AQ9UQD0 1980 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 SPTY2D1-AS1A0A0U1RR47 76 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 CCDC78A2IDD5 438 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 FADS2P1A8MWK0 482 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 TNFRSF10CO14798 259 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 TNFSF14O43557 240 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 DFNA5O60443 496 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 ELK3P41970 407 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 DNAJC3Q13217 504 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 PDE1CQ14123 709 aaPredicted RBP25.68■■□□□ 1.7
NME3-208ENST00000565379 ATP13A5Q4VNC0 1218 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 SPANXN3Q5MJ09 141 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 LDLRAP1Q5SW96 308 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 CCNI2Q6ZMN8 369 aaPredicted RBP25.68■■□□□ 1.7
NME3-208ENST00000565379 PROSER1Q86XN7 944 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 PELI3Q8N2H9 469 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 OR6P1Q8NGX9 317 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 GABPB2Q8TAK5 448 aaPredicted RBP25.68■■□□□ 1.7
NME3-208ENST00000565379 HEXDCQ8WVB3 486 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 UBXN4Q92575 508 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 FTSJ1Q9UET6 329 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 ZC3H7BQ9UGR2 993 aaKnown RBP25.68■■□□□ 1.7
NME3-208ENST00000565379 ATRXP46100 2492 aa25.68■■□□□ 1.7
NME3-208ENST00000565379 GPR89AB7ZAQ6 455 aa25.67■■□□□ 1.7
NME3-208ENST00000565379 TAF4O00268 1085 aa25.67■■□□□ 1.7
NME3-208ENST00000565379 GPR89BP0CG08 455 aa25.67■■□□□ 1.7
NME3-208ENST00000565379 PPARGP37231 505 aaPredicted RBP25.67■■□□□ 1.7
NME3-208ENST00000565379 ARSDP51689 593 aa25.67■■□□□ 1.7
NME3-208ENST00000565379 LYPLAL1Q5VWZ2 237 aa25.67■■□□□ 1.7
NME3-208ENST00000565379 CERS6Q6ZMG9 384 aa25.67■■□□□ 1.7
NME3-208ENST00000565379 LMNTD2Q8IXW0 634 aa25.67■■□□□ 1.7
NME3-208ENST00000565379 OR4L1Q8NH43 312 aa25.67■■□□□ 1.7
NME3-208ENST00000565379 PYROXD1Q8WU10 500 aa25.67■■□□□ 1.7
NME3-208ENST00000565379 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.67■■□□□ 1.73e-6■■■■□ 24.4
NME3-208ENST00000565379 ZNF669Q96BR6 464 aaPredicted RBP25.67■■□□□ 1.7
NME3-208ENST00000565379 WDR92Q96MX6 357 aa25.67■■□□□ 1.7
NME3-208ENST00000565379 PWWP2AQ96N64 755 aa25.67■■□□□ 1.7
NME3-208ENST00000565379 FMO2Q99518 471 aa25.67■■□□□ 1.7
NME3-208ENST00000565379 ZCCHC2Q9C0B9 1178 aaKnown RBP25.67■■□□□ 1.7
NME3-208ENST00000565379 CRLS1Q9UJA2 301 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms