RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 CRLS1Q9UJA2 301 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 COQ6Q9Y2Z9 468 aa11.01□□□□□ -0.65
SF3B3-205ENST00000564899 ASCC3Q8N3C0 2202 aaKnown RBP11□□□□□ -0.65
SF3B3-205ENST00000564899 C4orf47A7E2U8 309 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 H3BQF6 201 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 NDUFS3O75489 264 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 TM7SF2O76062 418 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 APBB3O95704 486 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 S1PR4O95977 384 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 AHSGP02765 367 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 ITGA2BP08514 1039 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 SNRPAP09012 282 aaKnown RBP11□□□□□ -0.65
SF3B3-205ENST00000564899 UGT1A6P19224 532 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 UGT1A1P22309 533 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 UGT1A4P22310 534 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 GABRB3P28472 473 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 HOXA6P31267 233 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 UGT1A3P35503 534 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 UGT1A5P35504 534 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 LEPRP48357 1165 aaKnown RBP11□□□□□ -0.65
SF3B3-205ENST00000564899 TTPAP49638 278 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 CDKN1CP49918 316 aaPredicted RBP11□□□□□ -0.65
SF3B3-205ENST00000564899 TPMTP51580 245 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 LIMK2P53671 638 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 CREB5Q02930 508 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 ITGA9Q13797 1035 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 DBN1Q16643 649 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 PLK5Q496M5 336 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 GPR33Q49SQ1 333 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 RNF187Q5TA31 235 aaPredicted RBP11□□□□□ -0.65
SF3B3-205ENST00000564899 MROH9Q5TGP6 573 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 SEL1L3Q68CR1 1132 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 KCTD16Q68DU8 428 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 KIAA1161Q6NSJ0 714 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 ZNF765Q7L2R6 523 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 CYP2U1Q7Z449 544 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 ZC3HC1Q86WB0 502 aaKnown RBP11□□□□□ -0.65
SF3B3-205ENST00000564899 SERPINA9Q86WD7 417 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 PIANPQ8IYJ0 282 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 CNPY4Q8N129 248 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 TRAM1L1Q8N609 369 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 PNPLA1Q8N8W4 532 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 KDF1Q8NAX2 398 aaPredicted RBP11□□□□□ -0.65
SF3B3-205ENST00000564899 DTX3LQ8TDB6 740 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 SCAMP4Q969E2 229 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 ULK4Q96C45 1275 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 AP2M1Q96CW1 435 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 MTBPQ96DY7 904 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 VPS39Q96JC1 886 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 ATP6V1G3Q96LB4 118 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 TCF12Q99081 682 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 TTC1Q99614 292 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 EDEM2Q9BV94 578 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 RIOK2Q9BVS4 552 aaKnown RBP11□□□□□ -0.65
SF3B3-205ENST00000564899 SPATA16Q9BXB7 569 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 DUSP15Q9H1R2 295 aaPredicted RBP11□□□□□ -0.65
SF3B3-205ENST00000564899 ABCG8Q9H221 673 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 PREBQ9HCU5 417 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 CD93Q9NPY3 652 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 INTS10Q9NVR2 710 aaKnown RBP11□□□□□ -0.65
SF3B3-205ENST00000564899 USP36Q9P275 1121 aaKnown RBP11□□□□□ -0.65
SF3B3-205ENST00000564899 NOVA2Q9UNW9 492 aaKnown RBP11□□□□□ -0.65
SF3B3-205ENST00000564899 VPS9D1Q9Y2B5 631 aa11□□□□□ -0.65
SF3B3-205ENST00000564899 TRBV5-4A0A0C4DH59 114 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 A0A1W2PQU0 124 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 UBA6A0AVT1 1052 aaPredicted RBP10.99□□□□□ -0.65
SF3B3-205ENST00000564899 LNP1A1A4G5 178 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 IGLON5A6NGN9 336 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 FAM47DPA6NHR8 397 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 HMGB1P1B2RPK0 211 aaPredicted RBP10.99□□□□□ -0.65
SF3B3-205ENST00000564899 TRIM49D1C9J1S8 452 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 RNGTTO60942 597 aaKnown RBP10.99□□□□□ -0.65
SF3B3-205ENST00000564899 HAUS5O94927 633 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 PPARGP37231 505 aaPredicted RBP10.99□□□□□ -0.65
SF3B3-205ENST00000564899 RPS21P63220 83 aaKnown RBP10.99□□□□□ -0.65
SF3B3-205ENST00000564899 ILF2Q12905 390 aaKnown RBP10.99□□□□□ -0.65
SF3B3-205ENST00000564899 ATP13A5Q4VNC0 1218 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 SETMARQ53H47 684 aaPredicted RBP10.99□□□□□ -0.65
SF3B3-205ENST00000564899 ZNF789Q5FWF6 425 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 TNFAIP8L3Q5GJ75 292 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 HENMT1Q5T8I9 393 aaKnown RBP10.99□□□□□ -0.65
SF3B3-205ENST00000564899 LYPLAL1Q5VWZ2 237 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 CNSTQ6PJW8 725 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 CERS6Q6ZMG9 384 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 HORMAD1Q86X24 394 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 NXPE1Q8N323 547 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 GPATCH11Q8N954 259 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 MZB1Q8WU39 189 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 LPGAT1Q92604 370 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 TLCD1Q96CP7 247 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 MCMBPQ9BTE3 642 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 ZSCAN5AQ9BUG6 496 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 BTBD1Q9H0C5 482 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 KDM4CQ9H3R0 1056 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 ITM2CQ9NQX7 267 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 KCTD5Q9NXV2 234 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 EBF1Q9UH73 591 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 INVSQ9Y283 1065 aa10.99□□□□□ -0.65
SF3B3-205ENST00000564899 HELZ2Q9BYK8 2649 aaKnown RBP10.99□□□□□ -0.65
SF3B3-205ENST00000564899 TBC1D3DA0A087WVF3 549 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms