RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	DPP8	Q6V1X1	898 aa	Predicted RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	LURAP1L	Q8IV03	231 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ABI1	Q8IZP0	508 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ITPA	Q9BY32	194 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	BHMG1	C9JSJ3	638 aa	Predicted RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	USP17L8	P0C7I0	530 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	FAU	P35544	74 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF33B	Q06732	778 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ZPBP2	Q6X784	338 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	TBC1D19	Q8N5T2	526 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	OR2T11	Q8NH01	316 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	DHRS4	Q9BTZ2	278 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	LRRC3	Q9BY71	257 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SACM1L	Q9NTJ5	587 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	TAS2R14	Q9NYV8	317 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	CIC	Q96RK0	1608 aa	Predicted RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	NT5C1B-RDH14	C9J2C7	533 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	HLA-F	P30511	346 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF438	Q7Z4V0	828 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	C4orf19	Q8IY42	314 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SERAC1	Q96JX3	654 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	POLH	Q9Y253	713 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	FAM159B	A6NKW6	160 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288		F8VP50	259 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288		M0QZ92	97 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	PTBP1	P26599	531 aa	Known RBP eCLIP	4.23	□□□□□ -1.73	7e-7	■■■■□ 22.6
MACF1-231	ENST00000564288	ANKRD22	Q5VYY1	191 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	HHIPL2	Q6UWX4	724 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	GPSM1	Q86YR5	675 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	MSANTD3	Q96H12	275 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ZNF641	Q96N77	438 aa	Predicted RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ALPK1	Q96QP1	1244 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	TM9SF2	Q99805	663 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC7A5P2	Q9GIP4	190 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	FIS1	Q9Y3D6	152 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	NCAM1	P13591	858 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SNTB2	Q13425	540 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	KCNN1	Q92952	543 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	FICD	Q9BVA6	458 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	KCNN2	Q9H2S1	579 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RAD18	Q9NS91	495 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ERVK-10	P10266	1014 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	MIP	P30301	263 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	MAGEA2	P43356	314 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	LSM3	P62310	102 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ORC1	Q13415	861 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	CARTPT	Q16568	116 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	IDNK	Q5T6J7	187 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	BEND5	Q7L4P6	421 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	PRSS48	Q7RTY5	328 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	NPAS2	Q99743	824 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	IDI2	Q9BXS1	227 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ZBTB26	Q9HCK0	441 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	EBF1	Q9UH73	591 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RAB23	Q9ULC3	237 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ANKRD12	Q6UB98	2062 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	OPRL1	P41146	370 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	KCNC3	Q14003	757 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SPATA6L	Q8N4H0	392 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	GPRASP2	Q96D09	838 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	KCTD7	Q96MP8	289 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	GAD1	Q99259	594 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	LXN	Q9BS40	222 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	MAFF	Q9ULX9	164 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ERN1	O75460	977 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SEC14L2	O76054	403 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	HGF	P14210	728 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC27A3	Q5K4L6	730 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RIPOR3	Q96MK2	946 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	DCAF16	Q9NXF7	216 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	UPB1	Q9UBR1	384 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	PTPRJ	Q12913	1337 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	TCRBV5S4A2T	A0A5A2	114 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	PLA2G16	P53816	162 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RAB10	P61026	200 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	PLD1	Q13393	1074 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	VPS26B	Q4G0F5	336 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	COQ10A	Q96MF6	247 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	CNPPD1	Q9BV87	410 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	ACTR8	Q9H981	624 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SCPEP1	Q9HB40	452 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	EIF3K	Q9UBQ5	218 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	DGKB	Q9Y6T7	804 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RSL1D1	O76021	490 aa	Known RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	KCNH1	O95259	989 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RHEB	Q15382	184 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	WSCD2	Q2TBF2	565 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	MILR1	Q7Z6M3	343 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	CCDC71	Q8IV32	467 aa	Predicted RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	OR13F1	Q8NGS4	319 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	SLC20A1	Q8WUM9	679 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	NACC2	Q96BF6	587 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	NANOG	Q9H9S0	305 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	RBAK	Q9NYW8	714 aa	Predicted RBP	4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	COL20A1	Q9P218	1284 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	TEX264	Q9Y6I9	313 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	MS4A2	Q01362	244 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	FGL1	Q08830	312 aa		4.23	□□□□□ -1.73
MACF1-231	ENST00000564288	DPY19L1	Q2PZI1	675 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms