RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 JPH3Q8WXH2 748 aaPredicted RBP17.47■□□□□ 0.39
NME3-205ENST00000563854 HERPUD2Q9BSE4 406 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 C10orf88Q9H8K7 445 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 TRIM39Q9HCM9 518 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 PRDM8Q9NQV8 689 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 RSPH14Q9UHP6 348 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 DNAJC16Q9Y2G8 782 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 PCDHB11Q9Y5F2 797 aa17.47■□□□□ 0.39
NME3-205ENST00000563854 MGAQ8IWI9 3026 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 A8MU76 341 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 TK2O00142 265 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 HGSO14964 777 aaPredicted RBP17.46■□□□□ 0.39
NME3-205ENST00000563854 C1QL1O75973 258 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 THRAP10827 490 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 F3P13726 295 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 CFHR1Q03591 330 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 SEPT7Q16181 437 aaKnown RBP17.46■□□□□ 0.39
NME3-205ENST00000563854 SIRPB2Q5JXA9 342 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 MANEAQ5SRI9 462 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.46■□□□□ 0.39
NME3-205ENST00000563854 IYDQ6PHW0 289 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 PCSK4Q6UW60 755 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 KDELC1Q6UW63 502 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 AGBL5Q8NDL9 886 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 BLOC1S5Q8TDH9 187 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 HTR3CQ8WXA8 447 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 NCSTNQ92542 709 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 OXNAD1Q96HP4 312 aaPredicted RBP17.46■□□□□ 0.39
NME3-205ENST00000563854 SRPK1Q96SB4 655 aaKnown RBP17.46■□□□□ 0.39
NME3-205ENST00000563854 ACSL6Q9UKU0 697 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 SSUH2Q9Y2M2 353 aa17.46■□□□□ 0.39
NME3-205ENST00000563854 PDZK1P1A8MUH7 402 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 BUD23O43709 281 aaKnown RBP17.45■□□□□ 0.38
NME3-205ENST00000563854 NDUFA10O95299 355 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 FGF3P11487 239 aaPredicted RBP17.45■□□□□ 0.38
NME3-205ENST00000563854 TRA2AQ13595 282 aaKnown RBP eCLIP17.45■□□□□ 0.38
NME3-205ENST00000563854 LY6DQ14210 128 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 PDPK2PQ6A1A2 396 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 TMEM71Q6P5X7 295 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 LRRTM4Q86VH4 590 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 TRIM48Q8IWZ4 208 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 CCDC112Q8NEF3 446 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 ART4Q93070 314 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 PMEPA1Q969W9 287 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 SH3KBP1Q96B97 665 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 PANX2Q96RD6 677 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 DPYSL5Q9BPU6 564 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 FSD1LQ9BXM9 530 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 RBSNQ9H1K0 784 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 SARS2Q9NP81 518 aaKnown RBP17.45■□□□□ 0.38
NME3-205ENST00000563854 NFKBIL1Q9UBC1 381 aaPredicted RBP17.45■□□□□ 0.38
NME3-205ENST00000563854 KLHL3Q9UH77 587 aa17.45■□□□□ 0.38
NME3-205ENST00000563854 EPN1Q9Y6I3 576 aaPredicted RBP17.45■□□□□ 0.38
NME3-205ENST00000563854 KIR2DS5A0A0G2JLQ3 304 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 A0A0G2JNG1 304 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 A6NCN8 305 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 RCCD1A6NED2 376 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 EFCAB7A8K855 629 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 HACD1B0YJ81 288 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 KIR2DS3K7RE56 304 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 KMOO15229 486 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 CDK14O94921 469 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 CTNNA2P26232 953 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 RBL1P28749 1068 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 GTF2H3Q13889 308 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 KIR2DS5Q14953 304 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 PPP2R5EQ16537 467 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 ATP13A5Q4VNC0 1218 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 KHDC1Q4VXA5 237 aaKnown RBP17.44■□□□□ 0.38
NME3-205ENST00000563854 BBS12Q6ZW61 710 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 GLT6D1Q7Z4J2 308 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 TRAPPC5Q8IUR0 188 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 LSM14AQ8ND56 463 aaKnown RBP17.44■□□□□ 0.38
NME3-205ENST00000563854 MRGPRX2Q96LB1 330 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 PLEKHG4BQ96PX9 1271 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 FCRL5Q96RD9 977 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 TAAR9Q96RI9 348 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 VAT1Q99536 393 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 FAM118BQ9BPY3 351 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 TBC1D10AQ9BXI6 508 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 OCIAD1Q9NX40 245 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 SLC39A1Q9NY26 324 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 CPNE7Q9UBL6 633 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 TRIM10Q9UDY6 481 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 SLC23A2Q9UGH3 650 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 ADGRG1Q9Y653 693 aa17.44■□□□□ 0.38
NME3-205ENST00000563854 LOC285095A0A1B0GVY8 99 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 GPR89AB7ZAQ6 455 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 APOC4-APOC2K7ER74 178 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 GPR39O43194 453 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 EFSO43281 561 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 APOC2P02655 101 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 GPR89BP0CG08 455 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 ZNF7P17097 686 aaPredicted RBP17.43■□□□□ 0.38
NME3-205ENST00000563854 CTNNA1P35221 906 aaKnown RBP17.43■□□□□ 0.38
NME3-205ENST00000563854 SPAM1P38567 509 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 OTUD4Q01804 1114 aaKnown RBP17.43■□□□□ 0.38
NME3-205ENST00000563854 SQSTM1Q13501 440 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 SLC1A5Q15758 541 aa17.43■□□□□ 0.38
NME3-205ENST00000563854 FAM151BQ6UXP7 276 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms