RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 ART4Q93070 314 aa17■□□□□ 0.31
VPS9D1-203ENST00000563798 PMEPA1Q969W9 287 aa17■□□□□ 0.31
VPS9D1-203ENST00000563798 COL26A1Q96A83 441 aa17■□□□□ 0.31
VPS9D1-203ENST00000563798 PLEKHG4BQ96PX9 1271 aa17■□□□□ 0.31
VPS9D1-203ENST00000563798 TEFMQ96QE5 360 aaKnown RBP17■□□□□ 0.31
VPS9D1-203ENST00000563798 VPS35Q96QK1 796 aa17■□□□□ 0.31
VPS9D1-203ENST00000563798 GPR63Q9BZJ6 419 aa17■□□□□ 0.31
VPS9D1-203ENST00000563798 OR2AG1Q9H205 316 aa17■□□□□ 0.31
VPS9D1-203ENST00000563798 OCIAD1Q9NX40 245 aa17■□□□□ 0.31
VPS9D1-203ENST00000563798 CPNE7Q9UBL6 633 aa17■□□□□ 0.31
VPS9D1-203ENST00000563798 B3GALT1Q9Y5Z6 326 aa17■□□□□ 0.31
VPS9D1-203ENST00000563798 PIEZO2Q9H5I5 2752 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 MTSS1O43312 755 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 SPOPO43791 374 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 VEGFDO43915 354 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 LCA5LO95447 670 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 PIRTP0C851 137 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 CD68P34810 354 aaPredicted RBP16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 UGT1A3P35503 534 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 HMGCLP35914 325 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 NOP2P46087 812 aaKnown RBP16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 ATP1A2P50993 1020 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 DYNLT1P63172 113 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 MC2RQ01718 297 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 PCSK7Q16549 785 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 ODF2Q5BJF6 829 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 FAM182AQ5T1J6 154 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 DCAF12Q5T6F0 453 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 ALS2CLQ60I27 953 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 CCDC70Q6NSX1 233 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 KDELC1Q6UW63 502 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 WASH2PQ6VEQ5 465 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 SPOCD1Q6ZMY3 1216 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 KDELC2Q7Z4H8 507 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 TFB1MQ8WVM0 346 aaKnown RBP16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 VAT1Q99536 393 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 TIMM29Q9BSF4 260 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 TRABDQ9H4I3 376 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 WASH6PQ9NQA3 447 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 FBXO8Q9NRD0 319 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 SLC39A1Q9NY26 324 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 FAM153AQ9UHL3 310 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 HYOU1Q9Y4L1 999 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 SPO11Q9Y5K1 396 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 ALG6Q9Y672 507 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 SDK2Q58EX2 2172 aa16.99■□□□□ 0.31
VPS9D1-203ENST00000563798 MN1Q10571 1320 aaPredicted RBP16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 J3QKU1 62 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 KMOO15229 486 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 CST8O60676 142 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 ANKRD34CP0C6C1 535 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 NFATC2Q13469 925 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 ZDHHC20Q5W0Z9 365 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 SARM1Q6SZW1 724 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 ABRAXAS1Q6UWZ7 409 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 ZNF547Q8IVP9 402 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 KATNAL2Q8IYT4 538 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 ZPBPQ9BS86 351 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 SLC12A9Q9BXP2 914 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 PRDM8Q9NQV8 689 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 KLC4Q9NSK0 619 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 SAE1Q9UBE0 346 aaPredicted RBP16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 SLC23A2Q9UGH3 650 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 TMPRSS11EQ9UL52 423 aa16.98■□□□□ 0.31
VPS9D1-203ENST00000563798 EFCAB7A8K855 629 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 AURKAO14965 403 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 SNX2O60749 519 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 PMPCBO75439 489 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 C9P02748 559 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 SFTPCP11686 197 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 PECAM1P16284 738 aaPredicted RBP16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 ZNF7P17097 686 aaPredicted RBP16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 MAGEA1P43355 309 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 ADCY2Q08462 1091 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 TFDP3Q5H9I0 405 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 ZNF648Q5T619 568 aaPredicted RBP16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 AGAP9Q5VTM2 703 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 B4GALNT4Q76KP1 1039 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 LRRTM4Q86VH4 590 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 RCOR2Q8IZ40 523 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 TTC30BQ8N4P2 665 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 TC2NQ8N9U0 490 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 HTR3CQ8WXA8 447 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 NCSTNQ92542 709 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 RTP4Q96DX8 246 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 FCRL5Q96RD9 977 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 ARFGAP3Q9NP61 516 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 WDR70Q9NW82 654 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 SCHIP1Q9P0W5 487 aaPredicted RBP16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 PILRAQ9UKJ1 303 aa16.97■□□□□ 0.31
VPS9D1-203ENST00000563798 hCG_1818297A0A087WSY0 165 aa16.96■□□□□ 0.31
VPS9D1-203ENST00000563798 HACD1B0YJ81 288 aa16.96■□□□□ 0.31
VPS9D1-203ENST00000563798 TOX3O15405 576 aaPredicted RBP16.96■□□□□ 0.31
VPS9D1-203ENST00000563798 KCNJ13O60928 360 aa16.96■□□□□ 0.31
VPS9D1-203ENST00000563798 CDK14O94921 469 aa16.96■□□□□ 0.31
VPS9D1-203ENST00000563798 ZRANB2O95218 330 aaKnown RBP eCLIP16.96■□□□□ 0.31
VPS9D1-203ENST00000563798 ITGB6P18564 788 aa16.96■□□□□ 0.31
VPS9D1-203ENST00000563798 NFKB1P19838 968 aa16.96■□□□□ 0.31
VPS9D1-203ENST00000563798 WNT3AP56704 352 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms