RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 TMEM98Q9Y2Y6 226 aa18.63■□□□□ 0.57
RAB40C-207ENST00000563109 OAS3Q9Y6K5 1087 aaKnown RBP18.63■□□□□ 0.57
RAB40C-207ENST00000563109 V9GYY5 206 aaPredicted RBP18.63■□□□□ 0.57
RAB40C-207ENST00000563109 PRSS38A1L453 326 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 GPR89AB7ZAQ6 455 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 YKT6O15498 198 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 MTX2O75431 263 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 IVLP07476 585 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 GPR89BP0CG08 455 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 MCM3P25205 808 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 ARNTP27540 789 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 PMLP29590 882 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 ARCN1P48444 511 aaKnown RBP18.62■□□□□ 0.57
RAB40C-207ENST00000563109 TTPAP49638 278 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 ITIH4Q14624 930 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 SF3A2Q15428 464 aaKnown RBP18.62■□□□□ 0.57
RAB40C-207ENST00000563109 NEPROQ6NW34 567 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 ASCL5Q7RTU5 278 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 KCNMB4Q86W47 210 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 HID1Q8IV36 788 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 LMNTD2Q8IXW0 634 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 PIANPQ8IYJ0 282 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 CERS2Q96G23 380 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 PDXPQ96GD0 296 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 ELF4Q99607 663 aaPredicted RBP18.62■□□□□ 0.57
RAB40C-207ENST00000563109 SLC13A1Q9BZW2 595 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 OR2AG1Q9H205 316 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 CYP4F12Q9HCS2 524 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 PPANQ9NQ55 473 aaKnown RBP18.62■□□□□ 0.57
RAB40C-207ENST00000563109 ATXN10Q9UBB4 475 aa18.62■□□□□ 0.57
RAB40C-207ENST00000563109 LNP1A1A4G5 178 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 GOLGA8KD6RF30 607 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 GOLGA8TH3BQL2 631 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 SPAG6O75602 509 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 CDK14O94921 469 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 TNFP01375 233 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 CSF2P04141 144 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 CEACAM5P06731 702 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 GSTA2P09210 222 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 PRSS56P0CW18 603 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 NME1P15531 152 aaKnown RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 OGNP20774 298 aaKnown RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 CDKN1CP49918 316 aaPredicted RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 HNRNPKP61978 463 aaKnown RBP eCLIP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 TMEM115Q12893 351 aaPredicted RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 EIF2B5Q13144 721 aaKnown RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 FRG1Q14331 258 aaKnown RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 SLMAPQ14BN4 828 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 DBN1Q16643 649 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 ZNF423Q2M1K9 1284 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 ALG11Q2TAA5 492 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 HLA-BQ31612 363 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 AASDHQ4L235 1098 aaPredicted RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 ZNF648Q5T619 568 aaPredicted RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 RNF187Q5TA31 235 aaPredicted RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 ZNF470Q6ECI4 717 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 PRR23CQ6ZRP0 262 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 CAPN12Q6ZSI9 719 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 MICALCLQ6ZW33 695 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 MARK2Q7KZI7 788 aaKnown RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 RD3Q7Z3Z2 195 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 ADGRG6Q86SQ4 1221 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 GALNT13Q8IUC8 556 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 PHACTR4Q8IZ21 702 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 OR1E3Q8WZA6 343 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 TSACCQ96A04 125 aaPredicted RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 C9orf72Q96LT7 481 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 GAREM1Q9H706 876 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 CARS2Q9HA77 564 aaKnown RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 IL1RAPL1Q9NZN1 696 aa18.61■□□□□ 0.57
RAB40C-207ENST00000563109 APOBEC3BQ9UH17 382 aaKnown RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.61■□□□□ 0.57
RAB40C-207ENST00000563109 CACNA1EQ15878 2313 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 F8W8V4 182 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 ZNF8P17098 575 aaPredicted RBP18.6■□□□□ 0.57
RAB40C-207ENST00000563109 JUNDP17535 347 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 CA5AP35218 305 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 GNPDA1P46926 289 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 POLD2P49005 469 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 CCT8P50990 548 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 HK3P52790 923 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 ERCC6LQ2NKX8 1250 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 HSP90AA5PQ58FG0 334 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 ZNF542PQ5EBM4 170 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 RELL1Q8IUW5 271 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 RBFAQ8N0V3 343 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 DCLK2Q8N568 766 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 MINDY1Q8N5J2 469 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 GPR150Q8NGU9 434 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.6■□□□□ 0.577e-7■■■■■ 86.8
RAB40C-207ENST00000563109 OR2M4Q96R27 311 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 EDEM2Q9BV94 578 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 PARD6AQ9NPB6 346 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 MRPL40Q9NQ50 206 aaKnown RBP18.6■□□□□ 0.57
RAB40C-207ENST00000563109 MARCH4Q9P2E8 410 aaPredicted RBP18.6■□□□□ 0.57
RAB40C-207ENST00000563109 SUFUQ9UMX1 484 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 VPS9D1Q9Y2B5 631 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 DGKBQ9Y6T7 804 aa18.6■□□□□ 0.57
RAB40C-207ENST00000563109 NUAK1O60285 661 aa18.59■□□□□ 0.57
RAB40C-207ENST00000563109 GFRA3O60609 400 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms