RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 GPSM1Q86YR5 675 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 CPNE9Q8IYJ1 553 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 WFIKKN2Q8TEU8 576 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 ZNF483Q8TF39 744 aaPredicted RBP12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 WDR60Q8WVS4 1066 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 VOPP1Q96AW1 172 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 FAM136AQ96C01 138 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 ULK4Q96C45 1275 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 C19orf60Q96EN9 201 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 RPL10LQ96L21 214 aaKnown RBP12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 PLEKHG4BQ96PX9 1271 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 SLC30A3Q99726 388 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 NUSAP1Q9BXS6 441 aaKnown RBP12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 TNFRSF12AQ9NP84 129 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 IL26Q9NPH9 171 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 KLHL42Q9P2K6 505 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 GALPQ9UBC7 116 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 STOML1Q9UBI4 398 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 SLC7A8Q9UHI5 535 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 IKZF3Q9UKT9 509 aa12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 COPG1Q9Y678 874 aaKnown RBP12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.53□□□□□ -0.4
AC055717.2-201ENST00000561864 TSPAN11A1L157 253 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 NPIPB15A6NHN6 443 aaPredicted RBP12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 AGAP14A8MT82 685 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 AZIN1O14977 448 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 PAPLNO95428 1278 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 MLYCDO95822 493 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 S100BP04271 92 aaPredicted RBP12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 ASLP04424 464 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 CEBPBP17676 345 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 GNAZP19086 355 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 POLR2EP19388 210 aaKnown RBP12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 GCKP35557 465 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 RECQLP46063 649 aaPredicted RBP12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 POLR2LP62875 67 aaKnown RBP12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 NTHL1P78549 312 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 CLCQ05315 142 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 CAMK1Q14012 370 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 CHRNA6Q15825 494 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 KHDC1Q4VXA5 237 aaKnown RBP12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 LY6G5CQ5SRR4 150 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 TMEM198Q66K66 360 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 CRTC1Q6UUV9 634 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 GDPD4Q6W3E5 623 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 GRASPQ7Z6J2 395 aaPredicted RBP12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 ADIPOR2Q86V24 386 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 NXPE1Q8N323 547 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 KYQ8NBH2 561 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 EEF1AKMT1Q8WVE0 214 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 JADE3Q92613 823 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 ZNF707Q96C28 371 aaPredicted RBP12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 ZDHHC6Q9H6R6 413 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 MID1IP1Q9NPA3 183 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 PFDN4Q9NQP4 134 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 NKX1-2Q9UD57 310 aaPredicted RBP12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 ERVW-1Q9UQF0 538 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 C15orf41Q9Y2V0 281 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 FIS1Q9Y3D6 152 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 L3MBTL1Q9Y468 752 aa12.52□□□□□ -0.41
AC055717.2-201ENST00000561864 A0A0U1RQS6 177 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 LOC100653049A0A140TA62 436 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 UBDO15205 165 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 FKBP6O75344 327 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 KRT34O76011 436 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 KRT36O76013 467 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 SIX3O95343 332 aaPredicted RBP12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 ANP32DO95626 131 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 CYP2A6P11509 494 aaPredicted RBP12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 ZNF30P17039 623 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 DGKAP23743 735 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 NUDT2P50583 147 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 SH3BP2P78314 561 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 TBL3Q12788 808 aaKnown RBP12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 RCN1Q15293 331 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 TTLL9Q3SXZ7 439 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 UGT3A2Q3SY77 523 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 ACCSLQ4AC99 568 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 C1orf146Q5VVC0 180 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 LRRC66Q68CR7 880 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 AAGABQ6PD74 315 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 BRAT1Q6PJG6 821 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 DPY19L3Q6ZPD9 716 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 RPS27LQ71UM5 84 aaKnown RBP12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 MYLK4Q86YV6 388 aaPredicted RBP12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 DEFB107AQ8IZN7 70 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 MYO1HQ8N1T3 1032 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 CHCHD4Q8N4Q1 142 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 CELF5Q8N6W0 485 aaKnown RBP12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 OR56A4Q8NGH8 313 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 TWIST2Q8WVJ9 160 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 ASIC4Q96FT7 647 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 CLPTM1LQ96KA5 538 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 PANX3Q96QZ0 392 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 SERPINI1Q99574 410 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 EFCAB1Q9HAE3 211 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 SARS2Q9NP81 518 aaKnown RBP12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 LATS2Q9NRM7 1088 aa12.51□□□□□ -0.41
AC055717.2-201ENST00000561864 RAD18Q9NS91 495 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms