RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 RUVBL2Q9Y230 463 aaKnown RBP6.5□□□□□ -1.37
CAPN3-210ENST00000561817 ACOT9Q9Y305 439 aa6.5□□□□□ -1.37
CAPN3-210ENST00000561817 PLXNB3Q9ULL4 1909 aa6.5□□□□□ -1.37
CAPN3-210ENST00000561817 NPIPB15A6NHN6 443 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 TTC34A8MYJ7 566 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 PRRT4C9JH25 899 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 STX7O15400 261 aaKnown RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 DLX3O60479 287 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 LYPLA1O75608 230 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 TSPAN12O95859 305 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 ASLP04424 464 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 CTSLP07711 333 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 SRPRAP08240 638 aaKnown RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 RALBP11234 206 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 ALOX15P16050 662 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 BPIP17213 487 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 HOXB8P17481 243 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 POLR2EP19388 210 aaKnown RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 LHCGRP22888 699 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 SP100P23497 879 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 GRK2P25098 689 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 SERPINA4P29622 427 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 MC4RP32245 332 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 CASP2P42575 452 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 MAP2K3P46734 347 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 KCNC1P48547 511 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 CORO7P57737 925 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 DNAJB13P59910 316 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 PFKPQ01813 784 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 FCHO2Q0JRZ9 810 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 CCDC15Q0P6D6 951 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 STX3Q13277 289 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 TUBB3Q13509 450 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 GRAMD1BQ3KR37 738 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 TAF1BQ53T94 588 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 CTSL3PQ5NE16 218 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 NAIF1Q69YI7 327 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 VITQ6UXI7 678 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 TPRG1Q6ZUI0 275 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 TRPM8Q7Z2W7 1104 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 MAVSQ7Z434 540 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 CCDC91Q7Z6B0 441 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 ISCA2Q86U28 154 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 TSPAN33Q86UF1 283 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 SFTPA1Q8IWL2 248 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 LSMEM2Q8N112 164 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 LILRB2Q8N423 598 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 SPATA6LQ8N4H0 392 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 FITM2Q8N6M3 262 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 TXNDC5Q8NBS9 432 aaKnown RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 GABPB2Q8TAK5 448 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 CYB5D2Q8WUJ1 264 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 PDCD6IPQ8WUM4 868 aaKnown RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 SNRNP27Q8WVK2 155 aaKnown RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 NXPE3Q969Y0 559 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 TSPAN17Q96FV3 270 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 THOC1Q96FV9 657 aaKnown RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 ZFYVE19Q96K21 471 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 DMRTB1Q96MA1 342 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 MRPL57Q9BQC6 102 aaKnown RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 GATA5Q9BWX5 397 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 MYLK2Q9H1R3 596 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 MTG2Q9H4K7 406 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 FAM96AQ9H5X1 160 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 UBE2ZQ9H832 354 aaPredicted RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 ECT2Q9H8V3 914 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 BPIFA1Q9NP55 256 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 NPHS2Q9NP85 383 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 IL26Q9NPH9 171 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 THAP1Q9NVV9 213 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 THEGQ9P2T0 379 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 GALPQ9UBC7 116 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 XPR1Q9UBH6 696 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 SLC25A13Q9UJS0 675 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 TMPRSS11EQ9UL52 423 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 CDH7Q9ULB5 785 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 SLC12A4Q9UP95 1085 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 CRYL1Q9Y2S2 319 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 RRP15Q9Y3B9 282 aaKnown RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 OAS3Q9Y6K5 1087 aaKnown RBP6.49□□□□□ -1.37
CAPN3-210ENST00000561817 USH1CQ9Y6N9 552 aa6.49□□□□□ -1.37
CAPN3-210ENST00000561817 A0A1W2PQ67 120 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 TMEM114B3SHH9 223 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 ANKRD65E5RJM6 399 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 H3BMM5 538 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 ARNTLO00327 626 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 GPR39O43194 453 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 KLF4O43474 513 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 OR1I1O60431 355 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 TRIM13O60858 407 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 TBX10O75333 385 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 UBOX5O94941 541 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 CLDN7O95471 211 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 NFATC1O95644 943 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 UGT2B4P06133 528 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 C1SP09871 688 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 LTA4HP09960 611 aaKnown RBP6.48□□□□□ -1.37
CAPN3-210ENST00000561817 CCDC166P0CW27 439 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 MYL2P10916 166 aa6.48□□□□□ -1.37
CAPN3-210ENST00000561817 PKMP14618 531 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms