RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 EPN1Q9Y6I3 576 aaPredicted RBP10.17□□□□□ -0.78
CLK3-205ENST00000561673 BOD1L1Q8NFC6 3051 aa10.17□□□□□ -0.78
CLK3-205ENST00000561673 ARHGEF17Q96PE2 2063 aaPredicted RBP10.16□□□□□ -0.78
CLK3-205ENST00000561673 C2orf72A6NCS6 295 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 HACD1B0YJ81 288 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 CHUKO15111 745 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 GPR37O15354 613 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 MTX2O75431 263 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 NDUFA10O95299 355 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 EPOP01588 193 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 THRAP10827 490 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 FGF3P11487 239 aaPredicted RBP10.16□□□□□ -0.78
CLK3-205ENST00000561673 HMGCLP35914 325 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 CLCNKAP51800 687 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 RHDQ02161 417 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 SRSF6Q13247 344 aaKnown RBP10.16□□□□□ -0.78
CLK3-205ENST00000561673 TRA2AQ13595 282 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLK3-205ENST00000561673 PPP2R5EQ16537 467 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 KHDC1Q4VXA5 237 aaKnown RBP10.16□□□□□ -0.78
CLK3-205ENST00000561673 PDPK2PQ6A1A2 396 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 TMEM71Q6P5X7 295 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 BBS12Q6ZW61 710 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 PID1Q7Z2X4 250 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 ZFAND4Q86XD8 727 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 TMTC1Q8IUR5 882 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 SLC25A41Q8N5S1 370 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 HTR3CQ8WXA8 447 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 AHCYL2Q96HN2 611 aaKnown RBP10.16□□□□□ -0.78
CLK3-205ENST00000561673 OXNAD1Q96HP4 312 aaPredicted RBP10.16□□□□□ -0.78
CLK3-205ENST00000561673 MRFAP1L1Q96HT8 127 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 RBM41Q96IZ5 413 aaKnown RBP10.16□□□□□ -0.78
CLK3-205ENST00000561673 MRGPRX2Q96LB1 330 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 QKIQ96PU8 341 aaKnown RBP eCLIP10.16□□□□□ -0.78
CLK3-205ENST00000561673 FCRL5Q96RD9 977 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 VAT1Q99536 393 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 DPYSL5Q9BPU6 564 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 HERPUD2Q9BSE4 406 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 LUC7LQ9NQ29 371 aaKnown RBP10.16□□□□□ -0.78
CLK3-205ENST00000561673 KLC4Q9NSK0 619 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 KLHL8Q9P2G9 620 aaPredicted RBP10.16□□□□□ -0.78
CLK3-205ENST00000561673 PDP2Q9P2J9 529 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 CPNE7Q9UBL6 633 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 SLC23A2Q9UGH3 650 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 REXO2Q9Y3B8 237 aaKnown RBP10.16□□□□□ -0.78
CLK3-205ENST00000561673 PCDHA3Q9Y5H8 950 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 UNC13CQ8NB66 2214 aa10.16□□□□□ -0.78
CLK3-205ENST00000561673 GCN1Q92616 2671 aaKnown RBP10.15□□□□□ -0.78
CLK3-205ENST00000561673 BAHCC1Q9P281 2608 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 BSNQ9UPA5 3926 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 OR5K4A6NMS3 321 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 GPR89AB7ZAQ6 455 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 APOC4-APOC2K7ER74 178 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 KMOO15229 486 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 APOC2P02655 101 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 GPR89BP0CG08 455 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 LIPCP11150 499 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 F3P13726 295 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 ZNF7P17097 686 aaPredicted RBP10.15□□□□□ -0.78
CLK3-205ENST00000561673 FECHP22830 423 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 RBL1P28749 1068 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 CSTF2P33240 577 aaKnown RBP eCLIP10.15□□□□□ -0.78
CLK3-205ENST00000561673 CTNNA1P35221 906 aaKnown RBP10.15□□□□□ -0.78
CLK3-205ENST00000561673 CHRNA4P43681 627 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 ARSDP51689 593 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 COPS2P61201 443 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 C19orf57Q0VDD7 668 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 XRCC4Q13426 336 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 SLC1A5Q15758 541 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 PLA2G4EQ3MJ16 856 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 ATP13A5Q4VNC0 1218 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 TAF1BQ53T94 588 aaPredicted RBP10.15□□□□□ -0.78
CLK3-205ENST00000561673 TMEM164Q5U3C3 297 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 KIAA1614Q5VZ46 1190 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 WDR74Q6RFH5 385 aaPredicted RBP10.15□□□□□ -0.78
CLK3-205ENST00000561673 CRTC3Q6UUV7 619 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 RAD9BQ6WBX8 426 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 SLC9B2Q86UD5 537 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 DTX1Q86Y01 620 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 PHYKPLQ8IUZ5 450 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 ZNF547Q8IVP9 402 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 TTC30BQ8N4P2 665 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 AGBL5Q8NDL9 886 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 IPMKQ8NFU5 416 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 OR10G6Q8NH81 332 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 NCSTNQ92542 709 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 TTC9Q92623 222 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 PMEPA1Q969W9 287 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 WBP1Q96G27 269 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 CALR3Q96L12 384 aaKnown RBP10.15□□□□□ -0.78
CLK3-205ENST00000561673 PLEKHG4BQ96PX9 1271 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 TAAR9Q96RI9 348 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 B3GNT4Q9C0J1 378 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 LACRTQ9GZZ8 138 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 OSGEPL1Q9H4B0 414 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 TRABDQ9H4I3 376 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 IL26Q9NPH9 171 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 OCIAD1Q9NX40 245 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 SCHIP1Q9P0W5 487 aaPredicted RBP10.15□□□□□ -0.78
CLK3-205ENST00000561673 TRHDEQ9UKU6 1024 aa10.15□□□□□ -0.78
CLK3-205ENST00000561673 FASNP49327 2511 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms