RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 OSGEPL1Q9H4B0 414 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 PIEZO2Q9H5I5 2752 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 TMEM9Q9P0T7 183 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 PCDHGA7Q9Y5G6 932 aa17■□□□□ 0.31
CDC42BPB-208ENST00000561271 PRAMEF33A0A0G2JMD5 474 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 A0A0U1RQJ8 604 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 A6NCN8 305 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 BTNL10A8MVZ5 291 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 GPR39O43194 453 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 ZW10O43264 779 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 PRAMEF10O60809 474 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 MPSTP25325 297 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 UCNP55089 124 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 HHEXQ03014 270 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 CFHR1Q03591 330 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 MPP3Q13368 585 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 XRCC4Q13426 336 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 SLC1A5Q15758 541 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 INSCQ1MX18 579 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 ATP13A5Q4VNC0 1218 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 ARHGAP40Q5TG30 622 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 LRRC57Q8N9N7 239 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 BLOC1S5Q8TDH9 187 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 TMEM159Q96B96 161 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 CCDC97Q96F63 343 aaPredicted RBP16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 PLEKHG4BQ96PX9 1271 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 SRPK1Q96SB4 655 aaKnown RBP16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 SLC38A3Q99624 504 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 BAG1Q99933 345 aaPredicted RBP16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 DESI2Q9BSY9 194 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 FSD1LQ9BXM9 530 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 OSBPL8Q9BZF1 889 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 TRIM39Q9HCM9 518 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 TRIM10Q9UDY6 481 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 TMPRSS11EQ9UL52 423 aa16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 SNRNP200O75643 2136 aaKnown RBP16.99■□□□□ 0.31
CDC42BPB-208ENST00000561271 TEX51A0A1B0GUA7 166 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 CCDC66A2RUB6 948 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 BUD23O43709 281 aaKnown RBP16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 THRAP10827 490 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 F3P13726 295 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 HLA-DPA1P20036 260 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 PTPN7P35236 360 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 HMGCLP35914 325 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 LIMK2P53671 638 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 RWDD2BP57060 319 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 NFATC2Q13469 925 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 CLPPQ16740 277 aaPredicted RBP16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 GLT6D1Q7Z4J2 308 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 CDKL3Q8IVW4 592 aaPredicted RBP16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 SPC24Q8NBT2 197 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 USP7Q93009 1102 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 CALR3Q96L12 384 aaKnown RBP16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 FICDQ9BVA6 458 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 PRDM8Q9NQV8 689 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 KLC4Q9NSK0 619 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 FOXJ2Q9P0K8 574 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 TRHDEQ9UKU6 1024 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 DNAJC16Q9Y2G8 782 aa16.98■□□□□ 0.31
CDC42BPB-208ENST00000561271 GPR89AB7ZAQ6 455 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 CHUKO15111 745 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 DUX1O43812 170 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 EPOP01588 193 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 GPR89BP0CG08 455 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 RBP3P10745 1247 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 CCL4P13236 92 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 PSMB4P28070 264 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 SPAM1P38567 509 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 MAPK9P45984 424 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 EIF3EP60228 445 aaKnown RBP16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 GPLD1P80108 840 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 OLIG2Q13516 323 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 COL9A2Q14055 689 aaPredicted RBP16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 TGIF1Q15583 401 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 ITPRIPL1Q6GPH6 555 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 IYDQ6PHW0 289 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 FAM151BQ6UXP7 276 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 LRRTM4Q86VH4 590 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 ZNF547Q8IVP9 402 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 OR4D9Q8NGE8 314 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 OR10G6Q8NH81 332 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 PMEPA1Q969W9 287 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 AHCYL2Q96HN2 611 aaKnown RBP16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 VPS35Q96QK1 796 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 TRABDQ9H4I3 376 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 STN1Q9H668 368 aaKnown RBP16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 SARS2Q9NP81 518 aaKnown RBP16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 HACD3Q9P035 362 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 IL17CQ9P0M4 197 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 SLC23A2Q9UGH3 650 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 PACSIN2Q9UNF0 486 aaPredicted RBP16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 SSUH2Q9Y2M2 353 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 CFAP46Q8IYW2 2715 aa16.97■□□□□ 0.31
CDC42BPB-208ENST00000561271 GCN1Q92616 2671 aaKnown RBP16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 C9orf172C9J069 976 aa16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 HGSO14964 777 aaPredicted RBP16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 ATXN7O15265 892 aaPredicted RBP16.96■□□□□ 0.31
CDC42BPB-208ENST00000561271 NVLO15381 856 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms