RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TNNT1P13805 278 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 COMTP21964 271 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 UGT1A3P35503 534 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 CDKN2BP42772 138 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 NR2C2P49116 596 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 ATP1A2P50993 1020 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 EPHA4P54764 986 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 RAB15P59190 212 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 SNAP47Q5SQN1 464 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 DCAF12Q5T6F0 453 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 CCDC70Q6NSX1 233 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 BZW1Q7L1Q6 419 aaKnown RBP16.01■□□□□ 0.15
SNX1-213ENST00000561026 AVL9Q8NBF6 648 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 NCSTNQ92542 709 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 GLYATL1Q969I3 302 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 TEKT5Q96M29 485 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 SRPK1Q96SB4 655 aaKnown RBP16.01■□□□□ 0.15
SNX1-213ENST00000561026 ARHGAP9Q9BRR9 750 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.01■□□□□ 0.15
SNX1-213ENST00000561026 GPR63Q9BZJ6 419 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 PRDM8Q9NQV8 689 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 KLC4Q9NSK0 619 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 SAE1Q9UBE0 346 aaPredicted RBP16.01■□□□□ 0.15
SNX1-213ENST00000561026 SPTA1P02549 2419 aa16.01■□□□□ 0.15
SNX1-213ENST00000561026 SETXQ7Z333 2677 aaKnown RBP16.01■□□□□ 0.15
SNX1-213ENST00000561026 A0A0A6YYK5 440 aaPredicted RBP16■□□□□ 0.15
SNX1-213ENST00000561026 SPOPO43791 374 aa16■□□□□ 0.15
SNX1-213ENST00000561026 PMPCBO75439 489 aa16■□□□□ 0.15
SNX1-213ENST00000561026 BPIP17213 487 aa16■□□□□ 0.15
SNX1-213ENST00000561026 PTPN3P26045 913 aa16■□□□□ 0.15
SNX1-213ENST00000561026 NOP2P46087 812 aaKnown RBP16■□□□□ 0.15
SNX1-213ENST00000561026 CYP4F2P78329 520 aa16■□□□□ 0.15
SNX1-213ENST00000561026 TFDP2Q14188 446 aa16■□□□□ 0.15
SNX1-213ENST00000561026 PRKD1Q15139 912 aaPredicted RBP16■□□□□ 0.15
SNX1-213ENST00000561026 TAZQ16635 292 aa16■□□□□ 0.15
SNX1-213ENST00000561026 ANKS6Q68DC2 871 aa16■□□□□ 0.15
SNX1-213ENST00000561026 CNGA4Q8IV77 575 aa16■□□□□ 0.15
SNX1-213ENST00000561026 IL22RA1Q8N6P7 574 aa16■□□□□ 0.15
SNX1-213ENST00000561026 HTR3CQ8WXA8 447 aa16■□□□□ 0.15
SNX1-213ENST00000561026 PLEKHG4BQ96PX9 1271 aa16■□□□□ 0.15
SNX1-213ENST00000561026 TEFMQ96QE5 360 aaKnown RBP16■□□□□ 0.15
SNX1-213ENST00000561026 ANP32EQ9BTT0 268 aa16■□□□□ 0.15
SNX1-213ENST00000561026 TSPY26PQ9H489 355 aa16■□□□□ 0.15
SNX1-213ENST00000561026 EPB41L1Q9H4G0 881 aa16■□□□□ 0.15
SNX1-213ENST00000561026 SLC23A2Q9UGH3 650 aa16■□□□□ 0.15
SNX1-213ENST00000561026 SPO11Q9Y5K1 396 aa16■□□□□ 0.15
SNX1-213ENST00000561026 ASH1LQ9NR48 2969 aaKnown RBP16■□□□□ 0.15
SNX1-213ENST00000561026 TLN1Q9Y490 2541 aaKnown RBP16■□□□□ 0.15
SNX1-213ENST00000561026 AURKAO14965 403 aa16■□□□□ 0.15
SNX1-213ENST00000561026 CST8O60676 142 aa16■□□□□ 0.15
SNX1-213ENST00000561026 XRCC1P18887 633 aaPredicted RBP16■□□□□ 0.15
SNX1-213ENST00000561026 MAPK9P45984 424 aa16■□□□□ 0.15
SNX1-213ENST00000561026 UBE2IP63279 158 aaKnown RBP16■□□□□ 0.15
SNX1-213ENST00000561026 MC2RQ01718 297 aa16■□□□□ 0.15
SNX1-213ENST00000561026 TBR1Q16650 682 aa16■□□□□ 0.15
SNX1-213ENST00000561026 CRTC3Q6UUV7 619 aa16■□□□□ 0.15
SNX1-213ENST00000561026 TFB1MQ8WVM0 346 aaKnown RBP16■□□□□ 0.15
SNX1-213ENST00000561026 SLC12A9Q9BXP2 914 aa16■□□□□ 0.15
SNX1-213ENST00000561026 SPRY4Q9C004 299 aa16■□□□□ 0.15
SNX1-213ENST00000561026 OSGEPL1Q9H4B0 414 aa16■□□□□ 0.15
SNX1-213ENST00000561026 UCK1Q9HA47 277 aa16■□□□□ 0.15
SNX1-213ENST00000561026 FBXO8Q9NRD0 319 aa16■□□□□ 0.15
SNX1-213ENST00000561026 UBP1Q9NZI7 540 aa16■□□□□ 0.15
SNX1-213ENST00000561026 SCHIP1Q9P0W5 487 aaPredicted RBP16■□□□□ 0.15
SNX1-213ENST00000561026 PILRAQ9UKJ1 303 aa16■□□□□ 0.15
SNX1-213ENST00000561026 LILRA5A6NI73 299 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 AKR1B15C9JRZ8 316 aaPredicted RBP15.99■□□□□ 0.15
SNX1-213ENST00000561026 KMOO15229 486 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 PSTPIP1O43586 416 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 VEGFDO43915 354 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 MTX2O75431 263 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 FAM87AP0C7U9 286 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 SFTPCP11686 197 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 PECAM1P16284 738 aaPredicted RBP15.99■□□□□ 0.15
SNX1-213ENST00000561026 ZNF7P17097 686 aaPredicted RBP15.99■□□□□ 0.15
SNX1-213ENST00000561026 CD68P34810 354 aaPredicted RBP15.99■□□□□ 0.15
SNX1-213ENST00000561026 HMGCLP35914 325 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 WASHC5Q12768 1159 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 NFATC3Q12968 1075 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 TBX2Q13207 712 aaPredicted RBP15.99■□□□□ 0.15
SNX1-213ENST00000561026 LLGL1Q15334 1064 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 SPOCD1Q6ZMY3 1216 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 LRRTM4Q86VH4 590 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 PLXDC1Q8IUK5 500 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 ZNF547Q8IVP9 402 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 CACNA2D3Q8IZS8 1091 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 RNF214Q8ND24 703 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 RTP4Q96DX8 246 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 TBC1D10AQ9BXI6 508 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 STARD5Q9NSY2 213 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 FAM153AQ9UHL3 310 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 TMPRSS11EQ9UL52 423 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 ALG6Q9Y672 507 aa15.99■□□□□ 0.15
SNX1-213ENST00000561026 LOC285095A0A1B0GVY8 99 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 PRR19A6NJB7 356 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 MTSS1O43312 755 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 RAD1O60671 282 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 CDK14O94921 469 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 EPOP01588 193 aa15.98■□□□□ 0.15
SNX1-213ENST00000561026 LIFP15018 202 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms