RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 VWA8A3KMH1 1905 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 MYLKQ15746 1914 aa13.88□□□□□ -0.19
RABGGTA-220ENST00000560998 WASH4PA8MWX3 477 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 SDHDO14521 159 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 ACOX3O15254 700 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 HLA-DQB2P05538 268 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 CHRNB1P11230 501 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 GABARAPL2P60520 117 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 ILF2Q12905 390 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 FASTKQ14296 549 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 SKIV2LQ15477 1246 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 PCID2Q5JVF3 399 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 PIK3R6Q5UE93 754 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 DENND5AQ6IQ26 1287 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 TIGD7Q6NT04 549 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 UGT3A1Q6NUS8 523 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 PKN3Q6P5Z2 889 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 C11orf74Q86VG3 221 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 LRRC49Q8IUZ0 686 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 BPIFB6Q8NFQ5 453 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 IPMKQ8NFU5 416 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 SLC39A13Q96H72 371 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 MARK4Q96L34 752 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 C1orf74Q96LT6 269 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 MYRFLQ96LU7 910 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 CSF3RQ99062 836 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 FICDQ9BVA6 458 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 LHPPQ9H008 270 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 CAB39LQ9H9S4 337 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 MPP6Q9NZW5 540 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 MOXD2PA6NHM9 499 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 PSMD11O00231 422 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 ASNA1O43681 348 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 UGT2B11O75310 529 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 BCAS1O75363 584 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 ADRA1AP35348 466 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 TRPC1P48995 793 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 ATP4BP51164 291 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 GEMP55040 296 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 DLG2Q15700 870 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 PSMD5Q16401 504 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 VARS2Q5ST30 1063 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 PPP2R2DQ66LE6 453 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 CRTC3Q6UUV7 619 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 ZNF683Q8IZ20 524 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 ZCCHC7Q8N3Z6 543 aaKnown RBP13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 MFSD4AQ8N468 514 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 ACVR1CQ8NER5 493 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 CAPSLQ8WWF8 208 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 FKBP10Q96AY3 582 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 MED30Q96HR3 178 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 VPS39Q96JC1 886 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 PPP1R2P1Q96PQ5 205 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 OR2B2Q9GZK3 357 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 FBXO44Q9H4M3 255 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 RBM22Q9NW64 420 aaKnown RBP eCLIP13.87□□□□□ -0.194e-8■■■■□ 23.7
RABGGTA-220ENST00000560998 NSMCE4AQ9NXX6 385 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 CRNNQ9UBG3 495 aaPredicted RBP13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 SRRDQ9UH36 339 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 OAZ3Q9UMX2 235 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 VWA7Q9Y334 891 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 TESMINQ9Y4I5 508 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 PCDHB5Q9Y5E4 795 aa13.87□□□□□ -0.19
RABGGTA-220ENST00000560998 DOCK4Q8N1I0 1966 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 CCDC78A2IDD5 438 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 GOLGA8CPA6NN73 597 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 EI24O14681 340 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 SYN3O14994 580 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 KCNH1O95259 989 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 C2P06681 752 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 HSD17B1P14061 328 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 EEF1B2P24534 225 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 GRK4P32298 578 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 GRK3P35626 688 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 POLR2IP36954 125 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 MAGEA11P43364 429 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 CSRP3P50461 194 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 PLA2G16P53816 162 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 IRF9Q00978 393 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 BTLAQ7Z6A9 289 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 ZBTB46Q86UZ6 589 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 ZC3HC1Q86WB0 502 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 GALNT13Q8IUC8 556 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 CCDC117Q8IWD4 279 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 DDIASQ8IXT1 998 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 OFCC1Q8IZS5 231 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 KDM1BQ8NB78 822 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 SLC43A3Q8NBI5 491 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 FAM193BQ96PV7 902 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 GPR22Q99680 433 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 HOPXQ9BPY8 73 aaPredicted RBP13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 NOL6Q9H6R4 1146 aaKnown RBP13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 ANKHQ9HCJ1 492 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 FNIP2Q9P278 1114 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 ABCD2Q9UBJ2 740 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 ZNF639Q9UID6 485 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 SATB2Q9UPW6 733 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 AURKCQ9UQB9 309 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 SLC27A5Q9Y2P5 690 aa13.86□□□□□ -0.19
RABGGTA-220ENST00000560998 MTF2Q9Y483 593 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms