RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 VPS35Q96QK1 796 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 FRMD8P1Q9BZ68 369 aaPredicted RBP12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 FOXP3Q9BZS1 431 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 ZCCHC2Q9C0B9 1178 aaKnown RBP12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 STN1Q9H668 368 aaKnown RBP12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 LRRC40Q9H9A6 602 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 EPB41L5Q9HCM4 733 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 ATXN7L1Q9ULK2 861 aaPredicted RBP12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 DNAJC16Q9Y2G8 782 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 RAXQ9Y2V3 346 aa12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 PCYT1BQ9Y5K3 369 aaPredicted RBP12.82□□□□□ -0.36
CTDSPL2-209ENST00000560620 SCN8AQ9UQD0 1980 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 FREM2Q5SZK8 3169 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 A0A1W2PQM1 296 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 PDZK1P1A8MUH7 402 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 D6RAR5 112 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 GPR39O43194 453 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 PRAMEF1O95521 474 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 GAS8O95995 478 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 SLC2A4P14672 509 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 TPH1P17752 444 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 VCLP18206 1134 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 OR1D5P58170 312 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 RTP5Q14D33 572 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 SEPT7Q16181 437 aaKnown RBP12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 LONRF2Q1L5Z9 754 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 LDLRAP1Q5SW96 308 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 PIM3Q86V86 326 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 DNAAF3Q8N9W5 541 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 ZNF398Q8TD17 642 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 BRSK1Q8TDC3 778 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 GRAMD1AQ96CP6 724 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 AHCYL2Q96HN2 611 aaKnown RBP12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 SLC38A3Q99624 504 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 TLR10Q9BXR5 811 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 STRADBQ9C0K7 418 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 POLR1BQ9H9Y6 1135 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 RDH14Q9HBH5 336 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 PIH1D1Q9NWS0 290 aaKnown RBP12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 TBC1D29Q9UFV1 150 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 FEZ2Q9UHY8 353 aaPredicted RBP12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 FKBPLQ9UIM3 349 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 SATB2Q9UPW6 733 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 KCTD3Q9Y597 815 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 ENTPD2Q9Y5L3 495 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 ZFC3H1O60293 1989 aaKnown RBP12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 IGF2RP11717 2491 aa12.81□□□□□ -0.36
CTDSPL2-209ENST00000560620 TAF4O00268 1085 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 NTN3O00634 580 aaPredicted RBP12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 ZSCAN12O43309 604 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 CAPNS1P04632 268 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 ZNF7P17097 686 aaPredicted RBP12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 MSH3P20585 1137 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 RBMS1P29558 406 aaKnown RBP12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 HADHAP40939 763 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 INHBCP55103 352 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 HHEXQ03014 270 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 POU6F1Q14863 301 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 OASLQ15646 514 aaKnown RBP12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 KHDC1Q4VXA5 237 aaKnown RBP12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 PHF19Q5T6S3 580 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 PPP1R21Q6ZMI0 780 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 USP53Q70EK8 1073 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 B3GNT8Q7Z7M8 397 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 LINC00523Q86TU6 105 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 SLC9B2Q86UD5 537 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 ZNF761Q86XN6 746 aaPredicted RBP12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 TRIM48Q8IWZ4 208 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 LSMEM2Q8N112 164 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 OR13C4Q8NGS5 318 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 SLC37A2Q8TED4 501 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 TMEM74Q96NL1 305 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 ASB8Q9H765 288 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 PRDM8Q9NQV8 689 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 RAB6BQ9NRW1 208 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 KCNK4Q9NYG8 393 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 DKK4Q9UBT3 224 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 CRLS1Q9UJA2 301 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 SLC30A1Q9Y6M5 507 aa12.8□□□□□ -0.36
CTDSPL2-209ENST00000560620 CCDC187A0A096LP49 1063 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 CCDC78A2IDD5 438 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 OR2AG2A6NM03 316 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 TMX2-CTNND1H3BSU7 103 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 CHUKO15111 745 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 PPM1DO15297 605 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 RRP8O43159 456 aaKnown RBP12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 KRT37O76014 449 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 SRP72O76094 671 aaKnown RBP12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 AP2A1O95782 977 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 EML2O95834 649 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 F3P13726 295 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 MSNP26038 577 aaKnown RBP12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 RPL10P27635 214 aaKnown RBP12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 PBLDP30039 288 aaPredicted RBP12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 FDFT1P37268 417 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 MAPK9P45984 424 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 GPR3P46089 330 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 LSSP48449 732 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 NFATC2Q13469 925 aa12.79□□□□□ -0.36
CTDSPL2-209ENST00000560620 CCNG2Q16589 344 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms