RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 FANCD2OSQ96PS1 177 aa6.35□□□□□ -1.39
HERC1-208ENST00000560462 PPP1R9BQ96SB3 815 aa6.35□□□□□ -1.39
HERC1-208ENST00000560462 GSDMCQ9BYG8 508 aa6.35□□□□□ -1.39
HERC1-208ENST00000560462 LSG1Q9H089 658 aaKnown RBP6.35□□□□□ -1.39
HERC1-208ENST00000560462 EPS8L2Q9H6S3 715 aa6.35□□□□□ -1.39
HERC1-208ENST00000560462 KCNJ16Q9NPI9 418 aa6.35□□□□□ -1.39
HERC1-208ENST00000560462 MOSPD1Q9UJG1 213 aa6.35□□□□□ -1.39
HERC1-208ENST00000560462 RCAN3Q9UKA8 241 aa6.35□□□□□ -1.39
HERC1-208ENST00000560462 CDC42EP3Q9UKI2 254 aa6.35□□□□□ -1.39
HERC1-208ENST00000560462 LUC7L2Q9Y383 392 aaKnown RBP6.35□□□□□ -1.39
HERC1-208ENST00000560462 EMC9Q9Y3B6 208 aa6.35□□□□□ -1.39
HERC1-208ENST00000560462 EPPK1P58107 5090 aaKnown RBP6.34□□□□□ -1.39
HERC1-208ENST00000560462 MEGF11A6BM72 1044 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 GOLGA8IPA6NC78 632 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 GOLGA8JA6NMD2 632 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 FAM90A27PA6NNH2 459 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 CLDN4O14493 209 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 SPTLC2O15270 562 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 PRAMEF2O60811 474 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 ADAM11O75078 769 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 PMPCBO75439 489 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 TOXO94900 526 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 SCGB1D2O95969 90 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 IGLV3-27P01718 113 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 CRYABP02511 175 aaKnown RBP6.34□□□□□ -1.39
HERC1-208ENST00000560462 RAB40ALP0C0E4 278 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 SRCP12931 536 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 TRIM21P19474 475 aaKnown RBP6.34□□□□□ -1.39
HERC1-208ENST00000560462 KELP23276 732 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 OTX2P32243 289 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 CD68P34810 354 aaPredicted RBP6.34□□□□□ -1.39
HERC1-208ENST00000560462 DDIT3P35638 169 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 KRT2P35908 639 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 MAPK9P45984 424 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 FASLGP48023 281 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 SEPHS1P49903 392 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 SOX8P57073 446 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 RNF4P78317 190 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 KRTAP1-1Q07627 177 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 PEX6Q13608 980 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 SLBPQ14493 270 aaKnown RBP eCLIP6.34□□□□□ -1.39
HERC1-208ENST00000560462 WSCD2Q2TBF2 565 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 ADCK5Q3MIX3 580 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 ZACNQ401N2 412 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 MIDNQ504T8 468 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 C10orf62Q5T681 223 aaPredicted RBP6.34□□□□□ -1.39
HERC1-208ENST00000560462 UBAP2Q5T6F2 1119 aaKnown RBP6.34□□□□□ -1.39
HERC1-208ENST00000560462 PRAMEF17Q5VTA0 474 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 SLC30A9Q6PML9 568 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 NAPRTQ6XQN6 538 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 SPOCD1Q6ZMY3 1216 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 DPY19L3Q6ZPD9 716 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 TRAPPC11Q7Z392 1133 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 PLXDC1Q8IUK5 500 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 CRYBG2Q8N1P7 616 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 MYO1HQ8N1T3 1032 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 DTWD1Q8N5C7 304 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 OR1N1Q8NGS0 311 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 TTC1Q99614 292 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 TMPRSS13Q9BYE2 586 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 NLNQ9BYT8 704 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 CHST8Q9H2A9 424 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.34□□□□□ -1.39
HERC1-208ENST00000560462 ABI3Q9P2A4 366 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 NDOR1Q9UHB4 597 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 VPS28Q9UK41 221 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 ODF2LQ9ULJ1 636 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 HS3ST2Q9Y278 367 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 ZNF835Q9Y2P0 537 aa6.34□□□□□ -1.39
HERC1-208ENST00000560462 TNPO3Q9Y5L0 923 aaKnown RBP6.34□□□□□ -1.39
HERC1-208ENST00000560462 INTS1Q8N201 2190 aaKnown RBP6.34□□□□□ -1.4
HERC1-208ENST00000560462 TRRAPQ9Y4A5 3859 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 E9PLN8 166 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 K7ERQ8 282 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 CACNB4O00305 520 aaPredicted RBP6.33□□□□□ -1.4
HERC1-208ENST00000560462 PEX12O00623 359 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 AKAP10O43572 662 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 STX6O43752 255 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 DLX3O60479 287 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 MT-CO1P00395 513 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 KRT18P05783 430 aaKnown RBP6.33□□□□□ -1.4
HERC1-208ENST00000560462 CD53P19397 219 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 POLD2P49005 469 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 CXCR3P49682 368 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 NEK4P51957 841 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 KIAA1024LP59773 190 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 NUCB2P80303 420 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 PIN1Q13526 163 aaPredicted RBP6.33□□□□□ -1.4
HERC1-208ENST00000560462 HDAC1Q13547 482 aaPredicted RBP6.33□□□□□ -1.4
HERC1-208ENST00000560462 AUHQ13825 339 aaKnown RBP6.33□□□□□ -1.4
HERC1-208ENST00000560462 NKG7Q16617 165 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 AGAP7PQ5VUJ5 663 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 NXNQ6DKJ4 435 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 PRSS57Q6UWY2 283 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 C12orf54Q6X4T0 127 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 SCARA5Q6ZMJ2 495 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 Q6ZPB1 254 aaPredicted RBP6.33□□□□□ -1.4
HERC1-208ENST00000560462 UBE2R2Q712K3 238 aaPredicted RBP6.33□□□□□ -1.4
HERC1-208ENST00000560462 KIF18BQ86Y91 864 aa6.33□□□□□ -1.4
HERC1-208ENST00000560462 SPPL2CQ8IUH8 684 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms