RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ALS2CLQ60I27 953 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 IYDQ6PHW0 289 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 CHST15Q7LFX5 561 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-213ENST00000560175 CCNJLQ8IV13 435 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 LSMEM2Q8N112 164 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 SNIP1Q8TAD8 396 aaKnown RBP13.05□□□□□ -0.32
SMAD3-213ENST00000560175 GFM1Q96RP9 751 aaKnown RBP13.05□□□□□ -0.32
SMAD3-213ENST00000560175 TIMM29Q9BSF4 260 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 OR2AG1Q9H205 316 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 ASCL3Q9NQ33 180 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 TBC1D29Q9UFV1 150 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 SLC23A2Q9UGH3 650 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 DRG1Q9Y295 367 aaKnown RBP13.05□□□□□ -0.32
SMAD3-213ENST00000560175 ZKSCAN5Q9Y2L8 839 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 PKP3Q9Y446 797 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 PRKAB1Q9Y478 270 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 ARL5AQ9Y689 179 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 DNMT3AQ9Y6K1 912 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-213ENST00000560175 ADAMTS20P59510 1910 aa13.05□□□□□ -0.32
SMAD3-213ENST00000560175 GLYATL1P3A0A0U1RQE8 302 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 OR5K4A6NMS3 321 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 C2orf81A6NN90 581 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 ERI2A8K979 691 aaKnown RBP13.04□□□□□ -0.32
SMAD3-213ENST00000560175 H7C0S8 307 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 KMOO15229 486 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 STX7O15400 261 aaKnown RBP13.04□□□□□ -0.32
SMAD3-213ENST00000560175 TLX3O43711 291 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-213ENST00000560175 BRINP1O60477 761 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 UGT1A9O60656 530 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 KCNJ13O60928 360 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 KRT37O76014 449 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 SUN1O94901 812 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 CDK14O94921 469 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 AP2A1O95782 977 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 RPLP0P05388 317 aaKnown RBP13.04□□□□□ -0.32
SMAD3-213ENST00000560175 UGT1A6P19224 532 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 UGT1A1P22309 533 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 UGT1A4P22310 534 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 UGT1A3P35503 534 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 UGT1A5P35504 534 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 MLLT3P42568 568 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-213ENST00000560175 ZNF140P52738 457 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-213ENST00000560175 ERVPABLB-1P60509 514 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 ITGA9Q13797 1035 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 PTPRCAPQ14761 206 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 TBC1D25Q3MII6 688 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 ABRAXAS1Q6UWZ7 409 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 WASH2PQ6VEQ5 465 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 ARHGEF18Q6ZSZ5 1173 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 TMPRSS9Q7Z410 1059 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 SLITRK4Q8IW52 837 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 DDHD1Q8NEL9 900 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 ZNF398Q8TD17 642 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 ATG4AQ8WYN0 398 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 ATXN7L3BQ96GX2 97 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 ZNF578Q96N58 590 aaPredicted RBP13.04□□□□□ -0.32
SMAD3-213ENST00000560175 SLC46A1Q96NT5 459 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 ALS2CR12Q96Q35 445 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 TBL1YQ9BQ87 522 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 APOL2Q9BQE5 337 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 LRRC40Q9H9A6 602 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 UGT1A7Q9HAW7 530 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 UGT1A10Q9HAW8 530 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 UGT1A8Q9HAW9 530 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 SARS2Q9NP81 518 aaKnown RBP13.04□□□□□ -0.32
SMAD3-213ENST00000560175 WASH6PQ9NQA3 447 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 KCTD3Q9Y597 815 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 AK5Q9Y6K8 562 aa13.04□□□□□ -0.32
SMAD3-213ENST00000560175 ITPR1Q14643 2758 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 KIR2DS5A0A0G2JLQ3 304 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 A0A0G2JNG1 304 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 KIR2DS3K7RE56 304 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 BUD23O43709 281 aaKnown RBP13.03□□□□□ -0.32
SMAD3-213ENST00000560175 NRDCO43847 1150 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 CRTAMO95727 393 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 PTMAP06454 111 aaKnown RBP13.03□□□□□ -0.32
SMAD3-213ENST00000560175 F3P13726 295 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 ZNF7P17097 686 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-213ENST00000560175 XRCC1P18887 633 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-213ENST00000560175 CD1CP29017 333 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 EIF2S3P41091 472 aaKnown RBP13.03□□□□□ -0.32
SMAD3-213ENST00000560175 DMPKQ09013 629 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 EIF3IQ13347 325 aaKnown RBP13.03□□□□□ -0.32
SMAD3-213ENST00000560175 KIR2DS5Q14953 304 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 LDLRAP1Q5SW96 308 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 ZNF574Q6ZN55 896 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-213ENST00000560175 B3GNT8Q7Z7M8 397 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 LRRTM4Q86VH4 590 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 REXO1L1PQ8IX06 675 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 OR4K2Q8NGD2 314 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 WDR36Q8NI36 951 aaKnown RBP13.03□□□□□ -0.32
SMAD3-213ENST00000560175 SLC37A2Q8TED4 501 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 FGF11Q92914 225 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 TMEM74Q96NL1 305 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 SUDS3Q9H7L9 328 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-213ENST00000560175 ARFGAP3Q9NP61 516 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 PDP2Q9P2J9 529 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 SSUH2Q9Y2M2 353 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 RAXQ9Y2V3 346 aa13.03□□□□□ -0.32
SMAD3-213ENST00000560175 PIKFYVEQ9Y2I7 2098 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms