RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 TCEA2Q15560 299 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 SKIDA1Q1XH10 827 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 PCID2Q5JVF3 399 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 LDLRAP1Q5SW96 308 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 RNASEH2BQ5TBB1 312 aaKnown RBP16.64■□□□□ 0.25
RPL28-209ENST00000560055 NLRP9Q7RTR0 991 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 SNX20Q7Z614 316 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 CAND1Q86VP6 1230 aaKnown RBP16.64■□□□□ 0.25
RPL28-209ENST00000560055 GKN2Q86XP6 184 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 GALNT13Q8IUC8 556 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 APOLD1Q96LR9 279 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 ASB8Q9H765 288 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 SUDS3Q9H7L9 328 aaPredicted RBP16.64■□□□□ 0.25
RPL28-209ENST00000560055 SLC2A6Q9UGQ3 507 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 ASIC3Q9UHC3 531 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 CDC23Q9UJX2 597 aa16.64■□□□□ 0.25
RPL28-209ENST00000560055 PLXNB3Q9ULL4 1909 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 CCDC78A2IDD5 438 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 KIF2AO00139 706 aaPredicted RBP16.63■□□□□ 0.25
RPL28-209ENST00000560055 DNALI1O14645 258 aaPredicted RBP16.63■□□□□ 0.25
RPL28-209ENST00000560055 TTI1O43156 1089 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 GRID2O43424 1007 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 CKMT1AP12532 417 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 CKMT2P17540 419 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 ITGALP20701 1170 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 PMLP29590 882 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 ACADVLP49748 655 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 CRADDP78560 199 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 SARNPP82979 210 aaKnown RBP16.63■□□□□ 0.25
RPL28-209ENST00000560055 TMEM115Q12893 351 aaPredicted RBP16.63■□□□□ 0.25
RPL28-209ENST00000560055 ILF3Q12906 894 aaKnown RBP eCLIP16.63■□□□□ 0.25
RPL28-209ENST00000560055 LRP8Q14114 963 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 ARMC3Q5W041 872 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 MICALCLQ6ZW33 695 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 TAF8Q7Z7C8 310 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 ZNF547Q8IVP9 402 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 PPIL6Q8IXY8 311 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 PPHLN1Q8NEY8 458 aaKnown RBP16.63■□□□□ 0.25
RPL28-209ENST00000560055 SERPINB12Q96P63 405 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 KRT12Q99456 494 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 KIFC1Q9BW19 673 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 GSDMCQ9BYG8 508 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 MRM3Q9HC36 420 aaKnown RBP16.63■□□□□ 0.25
RPL28-209ENST00000560055 XAB2Q9HCS7 855 aaKnown RBP16.63■□□□□ 0.25
RPL28-209ENST00000560055 TREX1Q9NSU2 369 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 SYBUQ9NX95 663 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 BFARQ9NZS9 450 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 PRKAB1Q9Y478 270 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 PLEKHM1Q9Y4G2 1056 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 GPSM3Q9Y4H4 160 aa16.63■□□□□ 0.25
RPL28-209ENST00000560055 WDFY3Q8IZQ1 3526 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 USP24Q9UPU5 2620 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 ARHGEF17Q96PE2 2063 aaPredicted RBP16.62■□□□□ 0.25
RPL28-209ENST00000560055 AVILO75366 819 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 CDK14O94921 469 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 FTH1P19P0C7X4 201 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 ACP1P24666 158 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 MGAT1P26572 445 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 AK4P27144 223 aaPredicted RBP16.62■□□□□ 0.25
RPL28-209ENST00000560055 DNAJC3Q13217 504 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 GPR33Q49SQ1 333 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 OGFOD3Q6PK18 319 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 SLCO6A1Q86UG4 719 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 SLC35F3Q8IY50 421 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 PIANPQ8IYJ0 282 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 NXPE1Q8N323 547 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 GDAP1Q8TB36 358 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 SCG3Q8WXD2 468 aaKnown RBP16.62■□□□□ 0.25
RPL28-209ENST00000560055 ULK4Q96C45 1275 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 SGSM3Q96HU1 749 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 ZCCHC2Q9C0B9 1178 aaKnown RBP16.62■□□□□ 0.25
RPL28-209ENST00000560055 CHRAC1Q9NRG0 131 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 NCKIPSDQ9NZQ3 722 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 TAAR2Q9P1P5 351 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 ZNHIT2Q9UHR6 403 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 DOLKQ9UPQ8 538 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 PCDHGA1Q9Y5H4 931 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 SLC30A1Q9Y6M5 507 aa16.62■□□□□ 0.25
RPL28-209ENST00000560055 IGLV3-16A0A075B6K0 115 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 CCDC162PA2VCL2 907 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 PRR19A6NJB7 356 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 TP73O15350 636 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 PRSS56P0CW18 603 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 FOXN2P32314 431 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 CDKN1CP49918 316 aaPredicted RBP16.61■□□□□ 0.25
RPL28-209ENST00000560055 B4GALNT1Q00973 533 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 CACNG1Q06432 222 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 C2orf54Q08AI8 447 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 C11orf96Q7Z7L8 435 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 PCGF5Q86SE9 256 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 LRRTM4Q86VH4 590 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 HOOK3Q86VS8 718 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 AGGF1Q8N302 714 aaeCLIP16.61■□□□□ 0.25
RPL28-209ENST00000560055 MPP5Q8N3R9 675 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 ARL10Q8N8L6 244 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 RASGEF1AQ8N9B8 481 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 KYQ8NBH2 561 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 FAM46DQ8NEK8 389 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 GPR156Q8NFN8 814 aa16.61■□□□□ 0.25
RPL28-209ENST00000560055 HDAC10Q969S8 669 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms