RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 ZNF446Q9NWS9 450 aa20.45■□□□□ 0.86
PSEN1-225ENST00000560005 FAM153AQ9UHL3 310 aa20.45■□□□□ 0.86
PSEN1-225ENST00000560005 APPL1Q9UKG1 709 aa20.45■□□□□ 0.86
PSEN1-225ENST00000560005 NEU3Q9UQ49 428 aa20.45■□□□□ 0.86
PSEN1-225ENST00000560005 CLEC18AA5D8T8 446 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 EIF3HO15372 352 aaKnown RBP eCLIP20.44■□□□□ 0.86
PSEN1-225ENST00000560005 CD82P27701 267 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 SARNPP82979 210 aaKnown RBP20.44■□□□□ 0.86
PSEN1-225ENST00000560005 CDK16Q00536 496 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 KCNAB2Q13303 367 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 POLD3Q15054 466 aaPredicted RBP20.44■□□□□ 0.86
PSEN1-225ENST00000560005 PHF19Q5T6S3 580 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 AFMIDQ63HM1 303 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 ITPRIPL1Q6GPH6 555 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 CLEC18BQ6UXF7 455 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 TRMT10CQ7L0Y3 403 aaKnown RBP20.44■□□□□ 0.86
PSEN1-225ENST00000560005 TMPRSS9Q7Z410 1059 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 TMC3Q7Z5M5 1100 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 SPRED1Q7Z699 444 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 ATPAF2Q8N5M1 289 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 GLIS1Q8NBF1 620 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 CLEC18CQ8NCF0 446 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 SLC12A9Q9BXP2 914 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 C10orf88Q9H8K7 445 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 MFHAS1Q9Y4C4 1052 aa20.44■□□□□ 0.86
PSEN1-225ENST00000560005 LRP4O75096 1905 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.43■□□□□ 0.86
PSEN1-225ENST00000560005 MAP3K6O95382 1288 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 POP4O95707 220 aaKnown RBP20.43■□□□□ 0.86
PSEN1-225ENST00000560005 GSRP00390 522 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 GLB1P16278 677 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 HTR1BP28222 390 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 POLE2P56282 527 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 SRP54P61011 504 aaKnown RBP20.43■□□□□ 0.86
PSEN1-225ENST00000560005 SNRPD1P62314 119 aaKnown RBP20.43■□□□□ 0.86
PSEN1-225ENST00000560005 BASP1P80723 227 aaKnown RBP20.43■□□□□ 0.86
PSEN1-225ENST00000560005 NFATC4Q14934 902 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 C16orf72Q14CZ0 275 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 PARP6Q2NL67 630 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 MYLK3Q32MK0 819 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 PARP15Q460N3 678 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 ANKRD20A2Q5SQ80 823 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 CERCAMQ5T4B2 595 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 ATXN7L2Q5T6C5 722 aaPredicted RBP20.43■□□□□ 0.86
PSEN1-225ENST00000560005 ANKRD20A1Q5TYW2 823 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 ANKRD20A3Q5VUR7 823 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 GDPD4Q6W3E5 623 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 LEKR1Q6ZMV7 388 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 RELL1Q8IUW5 271 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 SLITRK4Q8IW52 837 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 SFTPA2Q8IWL1 248 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 NPWQ8N729 165 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 NSMCE1Q8WV22 266 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 ARHGEF2Q92974 986 aaKnown RBP20.43■□□□□ 0.86
PSEN1-225ENST00000560005 SEMA6CQ9H3T2 930 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 HAUS2Q9NVX0 235 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 KLQ9UEF7 1012 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 MAN2B2Q9Y2E5 1009 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 COQ6Q9Y2Z9 468 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 UNC79Q9P2D8 2635 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 CHD5Q8TDI0 1954 aa20.43■□□□□ 0.86
PSEN1-225ENST00000560005 SDK2Q58EX2 2172 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 SPENQ96T58 3664 aaKnown RBP20.42■□□□□ 0.86
PSEN1-225ENST00000560005 GOLGA6CA6NDK9 693 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 GOLGA6BA6NDN3 693 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 DFFAO00273 331 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 PSMD3O43242 534 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 GOLGA6DP0CG33 693 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 ETFBP38117 255 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 CASRP41180 1078 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 MAGEA6P43360 314 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 PMS2P54278 862 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 ARL4CP56559 192 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 LRRC14Q15048 493 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 WSCD2Q2TBF2 565 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 TMEM164Q5U3C3 297 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 KCTD16Q68DU8 428 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 CENPUQ71F23 418 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 CPT1BQ92523 772 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 PDXPQ96GD0 296 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 RUFY1Q96T51 708 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 RAB6BQ9NRW1 208 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 NDFIP2Q9NV92 336 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 GOLGA6AQ9NYA3 693 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 OR1A2Q9Y585 309 aa20.42■□□□□ 0.86
PSEN1-225ENST00000560005 SPTBN1Q01082 2364 aaKnown RBP20.42■□□□□ 0.86
PSEN1-225ENST00000560005 LRRK1Q38SD2 2015 aa20.41■□□□□ 0.86
PSEN1-225ENST00000560005 STMND1H3BQB6 276 aa20.41■□□□□ 0.86
PSEN1-225ENST00000560005 MATN3O15232 486 aa20.41■□□□□ 0.86
PSEN1-225ENST00000560005 PNLIPP16233 465 aa20.41■□□□□ 0.86
PSEN1-225ENST00000560005 TPSB2P20231 275 aa20.41■□□□□ 0.86
PSEN1-225ENST00000560005 GEMIN4P57678 1058 aaKnown RBP20.41■□□□□ 0.86
PSEN1-225ENST00000560005 CBLBQ13191 982 aa20.41■□□□□ 0.86
PSEN1-225ENST00000560005 TPSAB1Q15661 275 aa20.41■□□□□ 0.86
PSEN1-225ENST00000560005 C4orf17Q53FE4 359 aa20.41■□□□□ 0.86
PSEN1-225ENST00000560005 TEX44Q53QW1 395 aa20.41■□□□□ 0.86
PSEN1-225ENST00000560005 PID1Q7Z2X4 250 aa20.41■□□□□ 0.86
PSEN1-225ENST00000560005 CROCCP2Q86T23 111 aa20.41■□□□□ 0.86
PSEN1-225ENST00000560005 ARHGAP12Q8IWW6 846 aa20.41■□□□□ 0.86
PSEN1-225ENST00000560005 PDIK1LQ8N165 341 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms