RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 SDE2Q6IQ49 451 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 FBXL19Q6PCT2 694 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 FAM151BQ6UXP7 276 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 USP45Q70EL2 814 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ERN2Q76MJ5 926 aaKnown RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 DPPA4Q7L190 304 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 LINC00523Q86TU6 105 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 TTC7BQ86TV6 843 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 RASSF3Q86WH2 238 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 TMPRSS6Q8IU80 811 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 DENND6AQ8IWF6 608 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 UBALD2Q8IYN6 164 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 PDIK1LQ8N165 341 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 HDDC3Q8N4P3 179 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 DEFB119Q8N690 84 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 TMEM105Q8N8V8 129 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 KDM1BQ8NB78 822 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 GPR26Q8NDV2 337 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 TMIEQ8NEW7 156 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 PPHLN1Q8NEY8 458 aaKnown RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 TSTD1Q8NFU3 115 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 PYROXD1Q8WU10 500 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 RUBCNQ92622 972 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 EDAQ92838 391 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 SCAMP4Q969E2 229 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 SIPA1Q96FS4 1042 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ATXN7L3BQ96GX2 97 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 MSANTD3Q96H12 275 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ZNF641Q96N77 438 aaPredicted RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 MCCC1Q96RQ3 725 aaPredicted RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 AGAP2Q99490 1192 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ADGRE3Q9BY15 652 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 GPR63Q9BZJ6 419 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 IL22Q9GZX6 179 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 PABPC3Q9H361 631 aaKnown RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 MFSD1Q9H3U5 465 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 EPHX3Q9H6B9 360 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ARNT2Q9HBZ2 717 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ARFGAP3Q9NP61 516 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 FZD3Q9NPG1 666 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 IARS2Q9NSE4 1012 aaKnown RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 TREX1Q9NSU2 369 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 HAUS2Q9NVX0 235 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 FBXL12Q9NXK8 326 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 GOLGA6AQ9NYA3 693 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 DLGAP2Q9P1A6 1054 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 SAMD15Q9P1V8 674 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 MARCH4Q9P2E8 410 aaPredicted RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 EBF1Q9UH73 591 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 SUN2Q9UH99 717 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 CYP8B1Q9UNU6 501 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 ZFR2Q9UPR6 939 aaKnown RBP5.2□□□□□ -1.58
SPG11-220ENST00000559933 PLAAQ9Y263 795 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 FADS3Q9Y5Q0 445 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 PSAT1Q9Y617 370 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 SLCO1B1Q9Y6L6 691 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 RPS6KL1Q9Y6S9 549 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 EML5Q05BV3 1969 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 WDFY4Q6ZS81 3184 aa5.2□□□□□ -1.58
SPG11-220ENST00000559933 PLXNB3Q9ULL4 1909 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 DOCK9Q9BZ29 2069 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 TCRBV9S1A1TA0A576 114 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 HEATR9A2RTY3 570 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 CCDC162PA2VCL2 907 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 IGLON5A6NGN9 336 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 SDR42E2A6NKP2 422 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 CHURC1-FNTBB4DL54 471 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 ANKRD66B4E2M5 251 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 K7ESF4 209 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 K7ESM1 405 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 AREL1O15033 823 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 SCAMP1O15126 338 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 RAD51BO15315 384 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 RNASEH1O60930 286 aaKnown RBP5.19□□□□□ -1.58
SPG11-220ENST00000559933 MTX2O75431 263 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 RPP40O75818 363 aaKnown RBP5.19□□□□□ -1.58
SPG11-220ENST00000559933 VAPBO95292 243 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 TTC4O95801 387 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 DNTTP04053 509 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 PCCBP05166 539 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 ELFN1P0C7U0 828 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 BPIP17213 487 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 UGT1A6P19224 532 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 BCKDHBP21953 392 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 UGT1A1P22309 533 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 UGT1A4P22310 534 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 ADRA1DP25100 572 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 ACSL1P33121 698 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 UGT1A3P35503 534 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 UGT1A5P35504 534 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 SLC1A2P43004 574 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 ARCN1P48444 511 aaKnown RBP5.19□□□□□ -1.58
SPG11-220ENST00000559933 NPY2RP49146 381 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 LIG3P49916 1009 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 TPMTP51580 245 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 DGKEP52429 567 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 STC1P52823 247 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 ADPRHP54922 357 aa5.19□□□□□ -1.58
SPG11-220ENST00000559933 SARNPP82979 210 aaKnown RBP5.19□□□□□ -1.58
SPG11-220ENST00000559933 XIAPP98170 497 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms