RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 C3orf38Q5JPI3 329 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 E4F1Q66K89 784 aaPredicted RBP7.37□□□□□ -1.23
SPG11-213ENST00000558988 DENND2CQ68D51 928 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 ERAP2Q6P179 960 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 ARHGAP36Q6ZRI8 547 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 RFX8Q6ZV50 586 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 ZNF571Q7Z3V5 609 aaPredicted RBP7.37□□□□□ -1.23
SPG11-213ENST00000558988 IRF2BP2Q7Z5L9 587 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 DCP2Q8IU60 420 aaKnown RBP7.37□□□□□ -1.23
SPG11-213ENST00000558988 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.37□□□□□ -1.23
SPG11-213ENST00000558988 NPWQ8N729 165 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 PDCD6IPQ8WUM4 868 aaKnown RBP7.37□□□□□ -1.23
SPG11-213ENST00000558988 CPLX3Q8WVH0 158 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 HSPH1Q92598 858 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 WWC2-AS2Q96NR7 200 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 DEPDC7Q96QD5 511 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 LGMNQ99538 433 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 SLC39A8Q9C0K1 460 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 PCDH12Q9NPG4 1184 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 PARVAQ9NVD7 372 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 SPASTQ9UBP0 616 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 MOSPD1Q9UJG1 213 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 MFHAS1Q9Y4C4 1052 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 OR1A2Q9Y585 309 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 CHD5Q8TDI0 1954 aa7.37□□□□□ -1.23
SPG11-213ENST00000558988 ZFYVE26Q68DK2 2539 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 LY6G6EA0A0G2JKS1 128 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 GOLGA6CA6NDK9 693 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 GOLGA6BA6NDN3 693 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 NPEPPSL1A6NEC2 478 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 DDX3XO00571 662 aaKnown RBP eCLIP7.36□□□□□ -1.23
SPG11-213ENST00000558988 RGS13O14921 159 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 AREL1O15033 823 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 CASC3O15234 703 aaKnown RBP7.36□□□□□ -1.23
SPG11-213ENST00000558988 PRAMEF11O60813 436 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 GCATO75600 419 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 UBOX5O94941 541 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 GOLGA6DP0CG33 693 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 TSHRP16473 764 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 ERCC2P18074 760 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 TGM2P21980 687 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 SERPINA4P29622 427 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 ACTN2P35609 894 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 SCNN1BP51168 640 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 PFN3P60673 137 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 ELP6Q0PNE2 266 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 PTK2BQ14289 1009 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 ZNF235Q14590 738 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 UGP2Q16851 508 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 WSCD2Q2TBF2 565 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 INO80DQ53TQ3 878 aaPredicted RBP7.36□□□□□ -1.23
SPG11-213ENST00000558988 ERMARDQ5T6L9 678 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 ZCCHC8Q6NZY4 707 aaKnown RBP7.36□□□□□ -1.23
SPG11-213ENST00000558988 ENPP7Q6UWV6 458 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 SRLQ86TD4 932 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 UMODL1-AS1Q8N2C9 162 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 ARFGAP1Q8N6T3 406 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 DCBLD1Q8N8Z6 715 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 DENND6BQ8NEG7 585 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 PCDH19Q8TAB3 1148 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 CASKIN2Q8WXE0 1202 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 TSACCQ96A04 125 aaPredicted RBP7.36□□□□□ -1.23
SPG11-213ENST00000558988 CENPTQ96BT3 561 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 ATXN7L3BQ96GX2 97 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 NAP1L5Q96NT1 182 aaPredicted RBP7.36□□□□□ -1.23
SPG11-213ENST00000558988 LENG8Q96PV6 779 aaPredicted RBP7.36□□□□□ -1.23
SPG11-213ENST00000558988 LRRC61Q9BV99 259 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 RETREG1Q9H6L5 497 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 ATP13A3Q9H7F0 1226 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 PDFQ9HBH1 243 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 GOLGA6AQ9NYA3 693 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 DKK4Q9UBT3 224 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 KLQ9UEF7 1012 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 PNMA8BQ9ULN7 279 aaPredicted RBP7.36□□□□□ -1.23
SPG11-213ENST00000558988 ATP8A1Q9Y2Q0 1164 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 RAI2Q9Y5P3 530 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 U3KQA8 63 aa7.36□□□□□ -1.23
SPG11-213ENST00000558988 ASXL3Q9C0F0 2248 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 ANKRD36A6QL64 1941 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 A0A087WV48 116 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 SYCE3A1L190 88 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 PMS2P1A4D2B8 440 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 TMEM191CA6NGB0 347 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 RASGRP1O95267 797 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 PRB1P04280 392 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 ELFN1P0C7U0 828 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 TCF4P15884 667 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 HTR1BP28222 390 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 SELENOPP49908 381 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 NDST2P52849 883 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 AIF1P55008 147 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 CXADRP78310 365 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 BCL2L1Q07817 233 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 KRT81Q14533 505 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 ACOX1Q15067 660 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 ALG11Q2TAA5 492 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 TBC1D25Q3MII6 688 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 TMEM52BQ4KMG9 183 aa7.35□□□□□ -1.23
SPG11-213ENST00000558988 SOWAHCQ53LP3 525 aaPredicted RBP7.35□□□□□ -1.23
SPG11-213ENST00000558988 KCTD16Q68DU8 428 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms