RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 CALCOCO2Q13137 446 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 PPP2R5CQ13362 524 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SLC39A6Q13433 755 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 MED21Q13503 144 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 PRPF4BQ13523 1007 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 THOC5Q13769 683 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 SPCS2Q15005 226 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 NONOQ15233 471 aaKnown RBP eCLIP3.28□□□□□ -1.882e-6■■■□□ 15.3
HERC1-203ENST00000558532 PUM3Q15397 648 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 SLC35G1Q2M3R5 365 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 NADK2Q4G0N4 442 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SBK1Q52WX2 424 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SFT2D3Q587I9 215 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 CEP78Q5JTW2 689 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 OGFRL1Q5TC84 451 aaPredicted RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 SEL1L2Q5TEA6 688 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 IL23RQ5VWK5 629 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 KRTAP5-3Q6L8H2 238 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ZNF449Q6P9G9 518 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 DCLRE1AQ6PJP8 1040 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 CATSPERGQ6ZRH7 1159 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 FAM47EQ6ZV65 393 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 RNF44Q7L0R7 432 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 C1QL2Q7Z5L3 287 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ARPINQ7Z6K5 226 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SATL1Q86VE3 508 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ZNF410Q86VK4 478 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 LRRC6Q86X45 466 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ERI1Q8IV48 349 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 MAP7D3Q8IWC1 876 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ZNF34Q8IZ26 560 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 GALNT4Q8N4A0 578 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 UBL4BQ8N7F7 174 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ZNF713Q8N859 430 aaPredicted RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 C11orf44Q8N8P7 122 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ANKRD42Q8N9B4 389 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SYT2Q8N9I0 419 aaPredicted RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 BBOF1Q8ND07 529 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 GDAP1Q8TB36 358 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 MGARPQ8TDB4 240 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 DDI1Q8WTU0 396 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 TMEM174Q8WUU8 243 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 PSPC1Q8WXF1 523 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 ZNF75CPQ92670 426 aaPredicted RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 SLC35C1Q96A29 364 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ARHGEF26Q96DR7 871 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 CALML4Q96GE6 196 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ZDHHC12Q96GR4 267 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SNF8Q96H20 258 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 ASB2Q96Q27 587 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 PANX3Q96QZ0 392 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 DDX50Q9BQ39 737 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 SH2D3AQ9BRG2 576 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.28□□□□□ -1.88
HERC1-203ENST00000558532 EIF2AQ9BY44 585 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 SLC2A11Q9BYW1 496 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 CRNKL1Q9BZJ0 848 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 TRIM31Q9BZY9 425 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 GPR88Q9GZN0 384 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 EBF3Q9H4W6 596 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 KCNK13Q9HB14 408 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 S100A14Q9HCY8 104 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SLCO1B3Q9NPD5 702 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 GIN1Q9NXP7 522 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 QPCTLQ9NXS2 382 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 BARHL2Q9NY43 387 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 UBAP1Q9NZ09 502 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 THEGQ9P2T0 379 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 UVRAGQ9P2Y5 699 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 DNAJB11Q9UBS4 358 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SLC7A8Q9UHI5 535 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SLC24A2Q9UI40 661 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 RAB26Q9ULW5 256 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 COG5Q9UP83 839 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 EXOC7Q9UPT5 735 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 CHMP2BQ9UQN3 213 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SLC27A6Q9Y2P4 619 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 FAM32AQ9Y421 112 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 HBS1LQ9Y450 684 aaKnown RBP3.28□□□□□ -1.88
HERC1-203ENST00000558532 TTLL3Q9Y4R7 772 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 SQORQ9Y6N5 450 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 LOXHD1Q8IVV2 1947 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 CDK5RAP2Q96SN8 1893 aa3.28□□□□□ -1.88
HERC1-203ENST00000558532 CACNA1IQ9P0X4 2223 aa3.27□□□□□ -1.89
HERC1-203ENST00000558532 GREB1LQ9C091 1923 aaPredicted RBP3.27□□□□□ -1.89
HERC1-203ENST00000558532 ASTN2O75129 1339 aaPredicted RBP3.27□□□□□ -1.89
HERC1-203ENST00000558532 SF3B1O75533 1304 aaKnown RBP eCLIP3.27□□□□□ -1.891e-7■■■■■ 51.7
HERC1-203ENST00000558532 MROH5Q6ZUA9 1318 aa3.27□□□□□ -1.89
HERC1-203ENST00000558532 TANC1Q9C0D5 1861 aa3.27□□□□□ -1.89
HERC1-203ENST00000558532 SMIM23A6NLE4 172 aa3.27□□□□□ -1.89
HERC1-203ENST00000558532 A8MVJ9 347 aa3.27□□□□□ -1.89
HERC1-203ENST00000558532 BOLA2-SMG1P6H3BVE0 249 aa3.27□□□□□ -1.89
HERC1-203ENST00000558532 FBP2O00757 339 aa3.27□□□□□ -1.89
HERC1-203ENST00000558532 THAP12O43422 761 aa3.27□□□□□ -1.89
HERC1-203ENST00000558532 EDIL3O43854 480 aa3.27□□□□□ -1.89
HERC1-203ENST00000558532 FAM189A1O60320 539 aa3.27□□□□□ -1.89
HERC1-203ENST00000558532 SPAG7O75391 227 aa3.27□□□□□ -1.89
HERC1-203ENST00000558532 TRMUO75648 421 aaKnown RBP3.27□□□□□ -1.89
HERC1-203ENST00000558532 PDE5AO76074 875 aa3.27□□□□□ -1.89
HERC1-203ENST00000558532 CAMTA2O94983 1202 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms