RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 CENPNQ96H22 339 aaPredicted RBP15.34■□□□□ 0.05
AP4E1-202ENST00000558439 FEM1CQ96JP0 617 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 C11orf84Q9BUA3 381 aaPredicted RBP15.34■□□□□ 0.05
AP4E1-202ENST00000558439 CHID1Q9BWS9 393 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 RMND5AQ9H871 391 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 SUCOQ9UBS9 1254 aaKnown RBP15.34■□□□□ 0.05
AP4E1-202ENST00000558439 OR1I1O60431 355 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 URODP06132 367 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 SH3BP2P78314 561 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 ZNF33AQ06730 810 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 PGM2L1Q6PCE3 622 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 TXNDC11Q6PKC3 985 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 PLD3Q8IV08 490 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 EID3Q8N140 333 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 GRIN3AQ8TCU5 1115 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 SH3KBP1Q96B97 665 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 TNKS2Q9H2K2 1166 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 ADGRE2Q9UHX3 823 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 ZNF229Q9UJW7 825 aa15.34■□□□□ 0.05
AP4E1-202ENST00000558439 GREB1LQ9C091 1923 aaPredicted RBP15.33■□□□□ 0.05
AP4E1-202ENST00000558439 ALPIP09923 528 aa15.33■□□□□ 0.05
AP4E1-202ENST00000558439 GDF5P43026 501 aa15.33■□□□□ 0.05
AP4E1-202ENST00000558439 RPS9P46781 194 aaKnown RBP15.33■□□□□ 0.05
AP4E1-202ENST00000558439 HMGCS1Q01581 520 aa15.33■□□□□ 0.05
AP4E1-202ENST00000558439 PRKCQQ04759 706 aa15.33■□□□□ 0.05
AP4E1-202ENST00000558439 KCTD11Q693B1 232 aa15.33■□□□□ 0.05
AP4E1-202ENST00000558439 TBC1D21Q8IYX1 336 aa15.33■□□□□ 0.05
AP4E1-202ENST00000558439 AHI1Q8N157 1196 aa15.33■□□□□ 0.05
AP4E1-202ENST00000558439 NAT16Q8N8M0 369 aa15.33■□□□□ 0.05
AP4E1-202ENST00000558439 MAGEH1Q9H213 219 aa15.33■□□□□ 0.05
AP4E1-202ENST00000558439 ARPC2O15144 300 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 MGEA5O60502 916 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 LRG1P02750 347 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 UROSP10746 265 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 GSK3BP49841 420 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 TUBB3Q13509 450 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 SPIDRQ14159 915 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 CHST15Q7LFX5 561 aaPredicted RBP15.33■□□□□ 0.04
AP4E1-202ENST00000558439 C8orf59Q8N0T1 100 aaPredicted RBP15.33■□□□□ 0.04
AP4E1-202ENST00000558439 PHC3Q8NDX5 983 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 OR10A6Q8NH74 314 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 NT5C3BQ969T7 300 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 FUBP3Q96I24 572 aaKnown RBP eCLIP15.33■□□□□ 0.04
AP4E1-202ENST00000558439 SMIM14Q96QK8 99 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 AARSD1Q9BTE6 412 aaKnown RBP15.33■□□□□ 0.04
AP4E1-202ENST00000558439 C2orf49Q9BVC5 232 aaPredicted RBP15.33■□□□□ 0.04
AP4E1-202ENST00000558439 SCML2Q9UQR0 700 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 TRIP11Q15643 1979 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 PRAMEF1O95521 474 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 ALDH1A1P00352 501 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 SERPIND1P05546 499 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 ANXA6P08133 673 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 CYP4B1P13584 511 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 ZNF37AP17032 561 aaPredicted RBP15.33■□□□□ 0.04
AP4E1-202ENST00000558439 CMPK2Q5EBM0 449 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 OGFRL1Q5TC84 451 aaPredicted RBP15.33■□□□□ 0.04
AP4E1-202ENST00000558439 SLC2A7Q6PXP3 512 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 CHSY3Q70JA7 882 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 SPATA19Q7Z5L4 167 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 ISCA2Q86U28 154 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 PGAP3Q96FM1 320 aaPredicted RBP15.33■□□□□ 0.04
AP4E1-202ENST00000558439 TFB2MQ9H5Q4 396 aaKnown RBP15.33■□□□□ 0.04
AP4E1-202ENST00000558439 GALNT8Q9NY28 637 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 GMPR2Q9P2T1 348 aaKnown RBP15.33■□□□□ 0.04
AP4E1-202ENST00000558439 GABRQQ9UN88 632 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 SLC45A1Q9Y2W3 748 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 DNAJC15Q9Y5T4 150 aa15.33■□□□□ 0.04
AP4E1-202ENST00000558439 I6L893 689 aaPredicted RBP15.32■□□□□ 0.04
AP4E1-202ENST00000558439 CDH2P19022 906 aaPredicted RBP15.32■□□□□ 0.04
AP4E1-202ENST00000558439 SOAT1P35610 550 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 DNAJB13P59910 316 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 LRRC73Q5JTD7 316 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 ZNF598Q86UK7 904 aaKnown RBP15.32■□□□□ 0.04
AP4E1-202ENST00000558439 RASAL3Q86YV0 1011 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 ARHGAP39Q9C0H5 1083 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 ROGDIQ9GZN7 287 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 ZDHHC6Q9H6R6 413 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 ZFYVE1Q9HBF4 777 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 IGSF5Q9NSI5 407 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 SMPD3Q9NY59 655 aaPredicted RBP15.32■□□□□ 0.04
AP4E1-202ENST00000558439 HOXA2O43364 376 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 ANXA5P08758 320 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 MSH3P20585 1137 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 MAPKAPK2P49137 400 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 SERINC3Q13530 473 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 SERINC5Q86VE9 423 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 TAGAPQ8N103 731 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 PPP3R2Q96LZ3 170 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 PLEKHG4BQ96PX9 1271 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 PTTG2Q9NZH5 202 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 ATXN10Q9UBB4 475 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 MYO9BQ13459 2157 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 EFNA1P20827 205 aaPredicted RBP15.32■□□□□ 0.04
AP4E1-202ENST00000558439 CCND3P30281 292 aaPredicted RBP15.32■□□□□ 0.04
AP4E1-202ENST00000558439 STC1P52823 247 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 SAPCD2Q86UD0 394 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 LSMEM2Q8N112 164 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 SFRP1Q8N474 314 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 VPS37AQ8NEZ2 397 aa15.32■□□□□ 0.04
AP4E1-202ENST00000558439 OR10Q1Q8NGQ4 319 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms