RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 OCRLQ01968 901 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 CAMK2GQ13555 558 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 ACAP2Q15057 778 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 CPNE9Q8IYJ1 553 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 AADATQ8N5Z0 425 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 COPS8Q99627 209 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 SLC6A17Q9H1V8 727 aa20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 MARCOQ9UEW3 520 aaPredicted RBP20.21■□□□□ 0.83
SNRPA1-205ENST00000558036 TRIM16O95361 564 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 SERPINE1P05121 402 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 PYGLP06737 847 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 DRD3P35462 400 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 SLC26A3P40879 764 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 CST6Q15828 149 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 TMEM196Q5HYL7 178 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 GPRC6AQ5T6X5 926 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 HENMT1Q5T8I9 393 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 LYPLAL1Q5VWZ2 237 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 DET1Q7L5Y6 550 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 RALGPS2Q86X27 583 aaPredicted RBP20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 SUGP1Q8IWZ8 645 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 PELI3Q8N2H9 469 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 IL17RCQ8NAC3 791 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 TXNDC5Q8NBS9 432 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 RAB3IL1Q8TBN0 382 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 EEF1AKMT1Q8WVE0 214 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 EXT2Q93063 718 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 RSPH9Q9H1X1 276 aaPredicted RBP20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 CYP4F12Q9HCS2 524 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 ZDHHC3Q9NYG2 299 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 SERGEFQ9UGK8 458 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 DCTN4Q9UJW0 460 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 PCDHB1Q9Y5F3 818 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 EBAG9O00559 213 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 ADAM23O75077 832 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 KITP10721 976 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 SLC1A6P48664 564 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 KPNA2P52292 529 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 OR4D1Q15615 310 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 ZNF648Q5T619 568 aaPredicted RBP20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 CCDC91Q7Z6B0 441 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 RFWD2Q8NHY2 731 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 RDH11Q8TC12 318 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 HLA-CQ95604 372 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 MKRN2Q9H000 416 aaKnown RBP20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 GNPTGQ9UJJ9 305 aa20.2■□□□□ 0.82
SNRPA1-205ENST00000558036 WNT9AO14904 365 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 TRIM13O60858 407 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 TSPAN12O95859 305 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 C6P13671 934 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 FOSL2P15408 326 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 RPS3P23396 243 aaKnown RBP eCLIP20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 NTSR1P30989 418 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 CCR10P46092 362 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 DCDC1P59894 354 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 ELP6Q0PNE2 266 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 KHDC1Q4VXA5 237 aaKnown RBP20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 PIP5KL1Q5T9C9 394 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 OR6Y1Q8NGX8 325 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 AP2M1Q96CW1 435 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 GATA5Q9BWX5 397 aaPredicted RBP20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 SYTL2Q9HCH5 934 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 TRPV5Q9NQA5 729 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 THAP1Q9NVV9 213 aa20.19■□□□□ 0.82
SNRPA1-205ENST00000558036 HGSO14964 777 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 RECQL5O94762 991 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 SLC25A14O95258 325 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 KLF8O95600 359 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 AKT1P31749 480 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 NSG1P42857 185 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 NAGLUP54802 743 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 FAM46CQ5VWP2 391 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 PLCD3Q8N3E9 789 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 GRAMD1AQ96CP6 724 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 LINGO1Q96FE5 620 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 COQ10AQ96MF6 247 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 GUCD1Q96NT3 240 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 HDAC8Q9BY41 377 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 MID2Q9UJV3 735 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 COMMD10Q9Y6G5 202 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 K7ESM1 405 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 RBP1P09455 135 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 COPAP53621 1224 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 DMTNQ08495 405 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 GRSF1Q12849 480 aaKnown RBP eCLIP20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 ZNF284Q2VY69 593 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 LIPMQ5VYY2 423 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 TRAM1L1Q8N609 369 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 PHF21BQ96EK2 531 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 DTD2Q96FN9 168 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 C7orf26Q96N11 449 aa20.18■□□□□ 0.82
SNRPA1-205ENST00000558036 COL4A2P08572 1712 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 A0A1W2PP55 124 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 NPEPPSL1A6NEC2 478 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 H0Y858 1186 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 CDC7O00311 574 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 RNASEH1O60930 286 aaKnown RBP20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 COL9A1P20849 921 aa20.17■□□□□ 0.82
SNRPA1-205ENST00000558036 SKIV2L2P42285 1042 aaKnown RBP20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms