RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ILF2Q12905 390 aaKnown RBP13.54□□□□□ -0.24
SHMT2-234ENST00000557703 BNIP3Q12983 259 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 ILKQ13418 452 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 GPRC6AQ5T6X5 926 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 IZUMO3Q5VZ72 239 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 CEP128Q6ZU80 1094 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 TMEM135Q86UB9 458 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 NXPE1Q8N323 547 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 OR13J1Q8NGT2 312 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 OR4L1Q8NH43 312 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 GDAP1Q8TB36 358 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 BAHD1Q8TBE0 780 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-234ENST00000557703 LMX1AQ8TE12 382 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 SETD7Q8WTS6 366 aaKnown RBP13.54□□□□□ -0.24
SHMT2-234ENST00000557703 TSACCQ96A04 125 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-234ENST00000557703 DCUN1D1Q96GG9 259 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 OR2M4Q96R27 311 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 TCF12Q99081 682 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 COPS8Q99627 209 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 TIMM29Q9BSF4 260 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 LRRC61Q9BV99 259 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 TSPYL1Q9H0U9 437 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 VPS37BQ9H9H4 285 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 CHRAC1Q9NRG0 131 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 FKBPLQ9UIM3 349 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 DOLKQ9UPQ8 538 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 VPS9D1Q9Y2B5 631 aa13.54□□□□□ -0.24
SHMT2-234ENST00000557703 COL5A1P20908 1838 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-234ENST00000557703 ZNF106Q9H2Y7 1883 aaKnown RBP13.54□□□□□ -0.24
SHMT2-234ENST00000557703 TCRBV7S3A2A0A539 114 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 OR5K4A6NMS3 321 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 EIF3HO15372 352 aaKnown RBP eCLIP13.53□□□□□ -0.24
SHMT2-234ENST00000557703 ZW10O43264 779 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 RAD51CO43502 376 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 BUD23O43709 281 aaKnown RBP13.53□□□□□ -0.24
SHMT2-234ENST00000557703 SH3BP5O60239 455 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 USP1O94782 785 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 POLBP06746 335 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 MSH3P20585 1137 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 NSG1P42857 185 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 ID4P47928 161 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 TTPAP49638 278 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 ARL4CP56559 192 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 PRAMEF14Q5SWL7 426 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 ANKRD22Q5VYY1 191 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 DUPD1Q68J44 220 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 KIAA0930Q6ICG6 404 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-234ENST00000557703 MRNIPQ6NTE8 343 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 OGFOD3Q6PK18 319 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 PACS1Q6VY07 963 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 RD3Q7Z3Z2 195 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 ADGRG6Q86SQ4 1221 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 SDCCAG8Q86SQ7 713 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-234ENST00000557703 LRRTM4Q86VH4 590 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 OR2I1PQ8NGU4 316 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 CALML6Q8TD86 181 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 SEC14L1Q92503 715 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 HDAC10Q969S8 669 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 PDXPQ96GD0 296 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 LINC00615Q96LM1 132 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-234ENST00000557703 BOCQ9BWV1 1114 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 OR2AG1Q9H205 316 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 ZDHHC3Q9NYG2 299 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 ATXN10Q9UBB4 475 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 FTSJ1Q9UET6 329 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 MOSPD1Q9UJG1 213 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 KCTD3Q9Y597 815 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 PCDHGA1Q9Y5H4 931 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 OAS3Q9Y6K5 1087 aaKnown RBP13.53□□□□□ -0.24
SHMT2-234ENST00000557703 DNAH14Q0VDD8 3507 aa13.53□□□□□ -0.24
SHMT2-234ENST00000557703 C17orf113A0A1B0GUU1 675 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 UGT1A9O60656 530 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 TRIM16O95361 564 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 LDOC1O95751 146 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-234ENST00000557703 GP1BAP07359 652 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 ATP1B2P14415 290 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-234ENST00000557703 CKMT2P17540 419 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 UGT1A6P19224 532 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 UGT1A1P22309 533 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 UGT1A4P22310 534 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 ACRV1P26436 265 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 MGAT1P26572 445 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 UGT1A3P35503 534 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 UGT1A5P35504 534 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 GNPDA1P46926 289 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 PLOD1Q02809 727 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-234ENST00000557703 DMPKQ09013 629 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 FRG1Q14331 258 aaKnown RBP13.52□□□□□ -0.25
SHMT2-234ENST00000557703 TRIP6Q15654 476 aaKnown RBP13.52□□□□□ -0.25
SHMT2-234ENST00000557703 HIF1AQ16665 826 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 BCL7AQ4VC05 210 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 CCDC38Q502W7 563 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 FASTKD1Q53R41 847 aaKnown RBP13.52□□□□□ -0.25
SHMT2-234ENST00000557703 ZNF542PQ5EBM4 170 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 ZRANB3Q5FWF4 1079 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 C6orf132Q5T0Z8 1188 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 RNF187Q5TA31 235 aaPredicted RBP13.52□□□□□ -0.25
SHMT2-234ENST00000557703 C8orf74Q6P047 294 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 CASC4Q6P4E1 433 aa13.52□□□□□ -0.25
SHMT2-234ENST00000557703 WASH2PQ6VEQ5 465 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms