RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TBC1D31Q96DN5 1066 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 ARSGQ96EG1 525 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 OLFM1Q99784 485 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 MLPHQ9BV36 600 aaPredicted RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 DUSP26Q9BV47 211 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 KCNN2Q9H2S1 579 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 KLHL31Q9H511 634 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 SEBOXQ9HB31 216 aaPredicted RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 THSD1Q9NS62 852 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 ABCB8Q9NUT2 735 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 PRMT7Q9NVM4 692 aaPredicted RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 TMEM45AQ9NWC5 275 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 KLHL13Q9P2N7 655 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 CACNG4Q9UBN1 327 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 IL17BQ9UHF5 180 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 SLC24A2Q9UI40 661 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 DBNLQ9UJU6 430 aaKnown RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 TLK1Q9UKI8 766 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 AGO2Q9UKV8 859 aaKnown RBP3.13□□□□□ -1.91
TRAV28-201ENST00000557548 ODF2LQ9ULJ1 636 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 LIPT1Q9Y234 373 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 ABCC9O60706 1549 aa3.13□□□□□ -1.91
TRAV28-201ENST00000557548 A0A1W2PPC1 479 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 FAM86B1E9PN63 330 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 TRIM77I1YAP6 450 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 ZNF263O14978 683 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 PRAMEF11O60813 436 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 SIX3O95343 332 aaPredicted RBP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 KLKB1P03952 638 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 FAM86B2P0C5J1 330 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 CHRNB1P11230 501 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 HLA-DPA1P20036 260 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 MYF6P23409 242 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 NR2F2P24468 414 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 PTPN3P26045 913 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 GABRA5P31644 462 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 HNRNPKP61978 463 aaKnown RBP eCLIP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 ITGA7Q13683 1181 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 NEDD9Q14511 834 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 SMC1AQ14683 1233 aaKnown RBP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 PTPRCAPQ14761 206 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 LASP1Q14847 261 aaKnown RBP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 MORF4L2Q15014 288 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 C2orf76Q3KRA6 126 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 ANKRD20A4Q4UJ75 823 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 ANKRD20A8PQ5CZ79 823 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 ANKRD20A2Q5SQ80 823 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 PIK3CD-AS1Q5SR53 167 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 ANKRD20A1Q5TYW2 823 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 ANKRD20A3Q5VUR7 823 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 RAB12Q6IQ22 244 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 METTL2BQ6P1Q9 378 aaKnown RBP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 CNSTQ6PJW8 725 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 GBP6Q6ZN66 633 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 LINC00696Q6ZRV3 163 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 ZBTB49Q6ZSB9 765 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 SPATA21Q7Z572 469 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 SPRED1Q7Z699 444 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 ARHGEF25Q86VW2 580 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 TMEM173Q86WV6 379 aaPredicted RBP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 ZFAND2BQ8WV99 257 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 APBB2Q92870 758 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 SPSB1Q96BD6 273 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 ERO1AQ96HE7 468 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 GRAMD2BQ96HH9 432 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 HES6Q96HZ4 224 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 METTL2AQ96IZ6 378 aaKnown RBP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 RMDN2Q96LZ7 410 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 AK8Q96MA6 479 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 DACH2Q96NX9 599 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 MS4A10Q96PG2 267 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 WDR83Q9BRX9 315 aaKnown RBP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 PI4K2AQ9BTU6 479 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 POLDIP3Q9BY77 421 aaKnown RBP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 TOR3AQ9H497 397 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 RAD21L1Q9H4I0 556 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 EQTNQ9NQ60 294 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 PDGFCQ9NRA1 345 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 AKAP7Q9P0M2 348 aaPredicted RBP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 SEPT10Q9P0V9 454 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 HEY2Q9UBP5 337 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 UBA2Q9UBT2 640 aaPredicted RBP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 MOSPD1Q9UJG1 213 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 TTC7AQ9ULT0 858 aaPredicted RBP3.12□□□□□ -1.91
TRAV28-201ENST00000557548 B3GALT5Q9Y2C3 310 aa3.12□□□□□ -1.91
TRAV28-201ENST00000557548 A0A087WV48 116 aa3.11□□□□□ -1.91
TRAV28-201ENST00000557548 A0A0G2JK05 382 aa3.11□□□□□ -1.91
TRAV28-201ENST00000557548 A0A1W2PRV1 198 aa3.11□□□□□ -1.91
TRAV28-201ENST00000557548 LRRD1A4D1F6 860 aa3.11□□□□□ -1.91
TRAV28-201ENST00000557548 NARSO43776 548 aaKnown RBP3.11□□□□□ -1.91
TRAV28-201ENST00000557548 HMOX1P09601 288 aa3.11□□□□□ -1.91
TRAV28-201ENST00000557548 CHRNB2P17787 502 aa3.11□□□□□ -1.91
TRAV28-201ENST00000557548 ADRA2CP18825 462 aa3.11□□□□□ -1.91
TRAV28-201ENST00000557548 CYP11B2P19099 503 aa3.11□□□□□ -1.91
TRAV28-201ENST00000557548 GPTP24298 496 aa3.11□□□□□ -1.91
TRAV28-201ENST00000557548 PSMA3P25788 255 aa3.11□□□□□ -1.91
TRAV28-201ENST00000557548 KCNJ1P48048 391 aa3.11□□□□□ -1.91
TRAV28-201ENST00000557548 YBEYP58557 167 aaPredicted RBP3.11□□□□□ -1.91
TRAV28-201ENST00000557548 TFF2Q03403 129 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms