RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 OR2AG1Q9H205 316 aa14□□□□□ -0.17
SNX6-210ENST00000557341 OSGEPL1Q9H4B0 414 aa14□□□□□ -0.17
SNX6-210ENST00000557341 EPB41L1Q9H4G0 881 aa14□□□□□ -0.17
SNX6-210ENST00000557341 TRIM39Q9HCM9 518 aa14□□□□□ -0.17
SNX6-210ENST00000557341 ARFGAP3Q9NP61 516 aa14□□□□□ -0.17
SNX6-210ENST00000557341 SLC39A1Q9NY26 324 aa14□□□□□ -0.17
SNX6-210ENST00000557341 PDP2Q9P2J9 529 aa14□□□□□ -0.17
SNX6-210ENST00000557341 B3GALT1Q9Y5Z6 326 aa14□□□□□ -0.17
SNX6-210ENST00000557341 ASH1LQ9NR48 2969 aaKnown RBP14□□□□□ -0.17
SNX6-210ENST00000557341 BSNQ9UPA5 3926 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 TLN1Q9Y490 2541 aaKnown RBP13.99□□□□□ -0.17
SNX6-210ENST00000557341 EFCAB7A8K855 629 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 B4E171 279 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 MTSS1O43312 755 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 CST8O60676 142 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 PMPCBO75439 489 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 PECAM1P16284 738 aaPredicted RBP13.99□□□□□ -0.17
SNX6-210ENST00000557341 TSPAN7P41732 249 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 TNNT3P45378 269 aaPredicted RBP13.99□□□□□ -0.17
SNX6-210ENST00000557341 MAPK9P45984 424 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 ARSDP51689 593 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 CLCNKAP51800 687 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 HADHBP55084 474 aaKnown RBP13.99□□□□□ -0.17
SNX6-210ENST00000557341 TAZQ16635 292 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 INSCQ1MX18 579 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 PLA2G4EQ3MJ16 856 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 TFDP3Q5H9I0 405 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 SNAP47Q5SQN1 464 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 DCAF12Q5T6F0 453 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 KAZNQ674X7 775 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 SPOCD1Q6ZMY3 1216 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 ADGRG6Q86SQ4 1221 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 LRRTM4Q86VH4 590 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 JPH3Q8WXH2 748 aaPredicted RBP13.99□□□□□ -0.17
SNX6-210ENST00000557341 TEKT5Q96M29 485 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 PLEKHG4BQ96PX9 1271 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 TEFMQ96QE5 360 aaKnown RBP13.99□□□□□ -0.17
SNX6-210ENST00000557341 ARHGAP9Q9BRR9 750 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 KLC4Q9NSK0 619 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 OCIAD1Q9NX40 245 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 CPNE7Q9UBL6 633 aa13.99□□□□□ -0.17
SNX6-210ENST00000557341 LILRA5A6NI73 299 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 B8ZZF3 427 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 CHUKO15111 745 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 KMOO15229 486 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 VEGFDO43915 354 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 BPIP17213 487 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 UGT1A3P35503 534 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 TBX2Q13207 712 aaPredicted RBP13.98□□□□□ -0.17
SNX6-210ENST00000557341 ZNF648Q5T619 568 aaPredicted RBP13.98□□□□□ -0.17
SNX6-210ENST00000557341 XKR5Q6UX68 686 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 CCDC50Q8IVM0 306 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 IL22RA1Q8N6P7 574 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 BMPERQ8N8U9 685 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 NCSTNQ92542 709 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 P3H4Q92791 437 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 EXTL1Q92935 676 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 NKD1Q969G9 470 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 VPS35Q96QK1 796 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 TIMM29Q9BSF4 260 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 TRABDQ9H4I3 376 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 PRDM8Q9NQV8 689 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 UBP1Q9NZI7 540 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 KLHL8Q9P2G9 620 aaPredicted RBP13.98□□□□□ -0.17
SNX6-210ENST00000557341 SAE1Q9UBE0 346 aaPredicted RBP13.98□□□□□ -0.17
SNX6-210ENST00000557341 FAM153AQ9UHL3 310 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 SPO11Q9Y5K1 396 aa13.98□□□□□ -0.17
SNX6-210ENST00000557341 MYO18BQ8IUG5 2567 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 MN1Q10571 1320 aaPredicted RBP13.97□□□□□ -0.17
SNX6-210ENST00000557341 A8MU76 341 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 J3QKU1 62 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 AURKAO14965 403 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 MTX2O75431 263 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 WT1P19544 449 aaPredicted RBP13.97□□□□□ -0.17
SNX6-210ENST00000557341 NFKB1P19838 968 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 HMGCLP35914 325 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 UBE2IP63279 158 aaKnown RBP13.97□□□□□ -0.17
SNX6-210ENST00000557341 WASHC5Q12768 1159 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 LLGL1Q15334 1064 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 LINC00303Q3SY05 128 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 ANKS6Q68DC2 871 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 ARHGAP22Q7Z5H3 698 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 ZC3H18Q86VM9 953 aaKnown RBP13.97□□□□□ -0.17
SNX6-210ENST00000557341 TRIM48Q8IWZ4 208 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 KATNAL2Q8IYT4 538 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 RBM41Q96IZ5 413 aaKnown RBP13.97□□□□□ -0.17
SNX6-210ENST00000557341 VAT1Q99536 393 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 TBC1D10AQ9BXI6 508 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 GOLPH3Q9H4A6 298 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 UCK1Q9HA47 277 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 DNAJC16Q9Y2G8 782 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.97□□□□□ -0.17
SNX6-210ENST00000557341 ALG6Q9Y672 507 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 PIKFYVEQ9Y2I7 2098 aa13.97□□□□□ -0.17
SNX6-210ENST00000557341 hCG_1818297A0A087WSY0 165 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 PDZK1P1A8MUH7 402 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 RAD1O60671 282 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 CDK14O94921 469 aa13.96□□□□□ -0.17
SNX6-210ENST00000557341 ZRANB2O95218 330 aaKnown RBP eCLIP13.96□□□□□ -0.17
SNX6-210ENST00000557341 VIPP01282 170 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms