RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 PSMA3P25788 255 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 AK4P27144 223 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-228ENST00000557302 ACTR1BP42025 376 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 PTGIRP43119 386 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 RPIAP49247 311 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 ACADVLP49748 655 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 ACTR1AP61163 376 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 TMEM115Q12893 351 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-228ENST00000557302 NR0B2Q15466 257 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 GPR33Q49SQ1 333 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 KHDC1Q4VXA5 237 aaKnown RBP13.43□□□□□ -0.26
SHMT2-228ENST00000557302 CCDC157Q569K6 752 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 PCID2Q5JVF3 399 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 TSTD2Q5T7W7 516 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 ANKRD22Q5VYY1 191 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 SLC30A9Q6PML9 568 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 CRTC3Q6UUV7 619 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 ZNF534Q76KX8 674 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 SNX20Q7Z614 316 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 SLCO6A1Q86UG4 719 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 NRROSQ86YC3 692 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 SLC35F3Q8IY50 421 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 ARL10Q8N8L6 244 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 MCUQ8NE86 351 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 CDKN2AIPNLQ96HQ2 116 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 XAB2Q9HCS7 855 aaKnown RBP13.43□□□□□ -0.26
SHMT2-228ENST00000557302 TOR4AQ9NXH8 423 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 SIRPGQ9P1W8 387 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 GULP1Q9UBP9 304 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 RIMKLBQ9ULI2 386 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 PRKAB1Q9Y478 270 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 PLEKHM1Q9Y4G2 1056 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 PCDHGA1Q9Y5H4 931 aa13.43□□□□□ -0.26
SHMT2-228ENST00000557302 PCYT1BQ9Y5K3 369 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-228ENST00000557302 LY6G6EA0A0G2JKS1 128 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 MED19A0JLT2 244 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-228ENST00000557302 KIF2AO00139 706 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-228ENST00000557302 CHUKO15111 745 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 RFPL3O75679 317 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 TUBB4AP04350 444 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 MYF5P13349 255 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 ACP5P13686 325 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 MSH3P20585 1137 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 ACP1P24666 158 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 MGAT1P26572 445 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 AKT1P31749 480 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 CA5AP35218 305 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 ARSDP51689 593 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 CACNG1Q06432 222 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 ILKQ13418 452 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 DHX34Q14147 1143 aaKnown RBP13.42□□□□□ -0.26
SHMT2-228ENST00000557302 ZRANB3Q5FWF4 1079 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 CHST15Q7LFX5 561 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-228ENST00000557302 LRRTM4Q86VH4 590 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 JAMLQ86YT9 394 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 TRAPPC5Q8IUR0 188 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 PPIL6Q8IXY8 311 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 NXPE1Q8N323 547 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 PNPLA1Q8N8W4 532 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 KYQ8NBH2 561 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 SPATA4Q8NEY3 305 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 OR13J1Q8NGT2 312 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 PEX13Q92968 403 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 KRT12Q99456 494 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 DPEP2Q9H4A9 486 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 TAAR2Q9P1P5 351 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 ST14Q9Y5Y6 855 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 U3KQA8 63 aa13.42□□□□□ -0.26
SHMT2-228ENST00000557302 CPED1A4D0V7 1026 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 AGAP14A8MT82 685 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 B4DGG1 531 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 CFAP99D6REC4 459 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 GOLGA8MH3BSY2 632 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 HAX1O00165 279 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 DNALI1O14645 258 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-228ENST00000557302 KMOO15229 486 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 TTI1O43156 1089 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 DKK1O94907 266 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 ADRB1P08588 477 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 RALBP11234 206 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 CDK4P11802 303 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 MLNP12872 115 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 CRADDP78560 199 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 ACVR1Q04771 509 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 RNASEH2BQ5TBB1 312 aaKnown RBP13.41□□□□□ -0.26
SHMT2-228ENST00000557302 AFTPHQ6ULP2 937 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 TAS2R42Q7RTR8 314 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 PCGF5Q86SE9 256 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 CAND1Q86VP6 1230 aaKnown RBP13.41□□□□□ -0.26
SHMT2-228ENST00000557302 RASGEF1AQ8N9B8 481 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 NAT8LQ8N9F0 302 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 ZDHHC1Q8WTX9 485 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 HEXDCQ8WVB3 486 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 ZNF592Q92610 1267 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 NAT6Q93015 286 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 HDAC10Q969S8 669 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 DCUN1D1Q96GG9 259 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 ZNF778Q96MU6 729 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 COPS8Q99627 209 aa13.41□□□□□ -0.26
SHMT2-228ENST00000557302 FAM96AQ9H5X1 160 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms