RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 VPS9D1Q9Y2B5 631 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ANKRD6Q9Y2G4 727 aa14.2□□□□□ -0.14
TRAPPC6B-206ENST00000556765 USP9YO00507 2555 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 METTL12A8MUP2 240 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TRIM24O15164 1050 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 HOXC11O43248 304 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 SNAP91O60641 907 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CD160O95971 181 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ASLP04424 464 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 APOA4P06727 396 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 PYGBP11216 843 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CDK4P11802 303 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CREB1P16220 341 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 GLDCP23378 1020 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 NFKBIAP25963 317 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 RPA3P35244 121 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 AFF3P51826 1226 aaKnown RBP14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 PRAMEP78395 509 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 PITRM1Q5JRX3 1037 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 FAM182AQ5T1J6 154 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 MROH9Q5TGP6 573 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 GKAP1Q5VSY0 366 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 AHI1Q8N157 1196 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 NDUFAF2Q8N183 169 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 SLC25A41Q8N5S1 370 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 C2CD4AQ8NCU7 369 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ZNF248Q8NDW4 579 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 GPR150Q8NGU9 434 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TCP10LQ8TDR4 215 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 NAF1Q96HR8 494 aaKnown RBP14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 SERAC1Q96JX3 654 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 LMLNQ96KR4 655 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CCT8L2Q96SF2 557 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 MCMBPQ9BTE3 642 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ATP13A3Q9H7F0 1226 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 IARS2Q9NSE4 1012 aaKnown RBP14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 USP36Q9P275 1121 aaKnown RBP14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CREBBPQ92793 2442 aa14.19□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TLN1Q9Y490 2541 aaKnown RBP14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 BSNQ9UPA5 3926 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 BIRC5O15392 142 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 SPAG7O75391 227 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 VAPBO95292 243 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 C1SP09871 688 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 DHRS4L1P0CG22 281 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 PABPC1P11940 636 aaKnown RBP14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 COL6A2P12110 1019 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 OGNP20774 298 aaKnown RBP14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TYK2P29597 1187 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CHRNA4P43681 627 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CD151P48509 253 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 KPNA2P52292 529 aaKnown RBP14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 E2F5Q15329 346 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CCDC153Q494R4 210 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ARMC12Q5T9G4 340 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TTC19Q6DKK2 380 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 MRNIPQ6NTE8 343 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 NEPROQ6NW34 567 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ESRP1Q6NXG1 681 aaKnown RBP14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 LVRNQ6Q4G3 990 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CES3Q6UWW8 571 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 KIAA0907Q7Z7F0 614 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ANKS4BQ8N8V4 417 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 WFDC5Q8TCV5 224 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 MGARPQ8TDB4 240 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 LRRC8CQ8TDW0 803 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 SREK1Q8WXA9 508 aaKnown RBP14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 VPS39Q96JC1 886 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TSNARE1Q96NA8 513 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TRIM56Q9BRZ2 755 aaKnown RBP14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ANKMY1Q9P2S6 941 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 PLLPQ9Y342 182 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 HEMK1Q9Y5R4 338 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 SLCO1B1Q9Y6L6 691 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TMEM131Q92545 1883 aa14.18□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ABCA12Q86UK0 2595 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 HMX2A2RU54 273 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ANKRD66B4E2M5 251 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 NEDD8-MDP1E9PL57 170 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 H0Y8X5 98 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 KLF11O14901 512 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 LDB2O43679 373 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 FZD6O60353 706 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 IL1BP01584 269 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TYRP14679 529 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CRABP2P29373 138 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 SERPINA4P29622 427 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 NNMTP40261 264 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ETV4P43268 484 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 LEPRP48357 1165 aaKnown RBP14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 WDR4P57081 412 aaKnown RBP14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 POU4F1Q01851 419 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 BCL2L1Q07817 233 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 DMTNQ08495 405 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 MPP2Q14168 576 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 TEAD4Q15561 434 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 CNGA3Q16281 694 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 ZSCAN26Q16670 478 aa14.17□□□□□ -0.14
TRAPPC6B-206ENST00000556765 GRAMD4Q6IC98 578 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms