RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 ADAMTS7Q9UKP4 1686 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 ALDH2P05091 517 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 CAPN1P07384 714 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 ZNF157P51786 506 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 ALDH6A1Q02252 535 aaKnown RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 PDCD4Q53EL6 469 aaKnown RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 ENKURQ8TC29 256 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 SPPL2BQ8TCT7 592 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 PSMG2Q969U7 264 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 PRICKLE1Q96MT3 831 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 TSSK3Q96PN8 268 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 YTHDF1Q9BYJ9 559 aaKnown RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 GMEB1Q9Y692 573 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 ALOX15P16050 662 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 EEFSECP57772 596 aaKnown RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 CDC42P60953 191 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 ZNF829Q3KNS6 432 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 TRIQKQ629K1 86 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 SVOPLQ8N434 492 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 SMYD1Q8NB12 490 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 GANCQ8TET4 914 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 STARD8Q92502 1023 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 FEM1CQ96JP0 617 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 IPPKQ9H8X2 491 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 CRNNQ9UBG3 495 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 ZNF490Q9ULM2 529 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 KLHL20Q9Y2M5 609 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 TAF1P21675 1872 aa14.92□□□□□ -0.02
ARHGEF40-207ENST00000556399 CCDC162PA2VCL2 907 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 H3BNH8 94 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 TREHO43280 583 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 TSC22D2O75157 780 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 EPHX2P34913 555 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 GPR15P49685 360 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 PABPC1LQ4VXU2 614 aaKnown RBP14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 GPR142Q7Z601 462 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 TMEM130Q8N3G9 435 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 TRIM63Q969Q1 353 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 BTN2A3PQ96KV6 586 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 LRTM1Q9HBL6 345 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 STMN3Q9NZ72 180 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 PDP1Q9P0J1 537 aaPredicted RBP14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 GABRDO14764 452 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 CKMP06732 381 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 GSTM1P09488 218 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 OR4Q2P0C623 313 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 HPCAL1P37235 193 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 ZNF280AP59817 542 aaPredicted RBP14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 TP53BP2Q13625 1128 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 PARP15Q460N3 678 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 PIM3Q86V86 326 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 RAB42Q8N4Z0 105 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 KCTD13Q8WZ19 329 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 UROC1Q96N76 676 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 SORT1Q99523 831 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 DYRK4Q9NR20 520 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 TRMT13Q9NUP7 481 aaKnown RBP14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 FAM234BA2RU67 622 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 MYL12BO14950 172 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 CTPS1P17812 591 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 PHKG1Q16816 387 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 LUZP2Q86TE4 346 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 TMEM135Q86UB9 458 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 EMILIN2Q9BXX0 1053 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 PCDH12Q9NPG4 1184 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 GIMAP2Q9UG22 337 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 SCELO95171 688 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 CDH1P12830 882 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 PROZP22891 400 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 GPC1P35052 558 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 DENND5AQ6IQ26 1287 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 UGT2A3Q6UWM9 527 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 ANKS3Q6ZW76 656 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 GLT1D1Q96MS3 346 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 TM6SF2Q9BZW4 377 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 TFB2MQ9H5Q4 396 aaKnown RBP14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 DNAJB9Q9UBS3 223 aa14.91□□□□□ -0.02
ARHGEF40-207ENST00000556399 TRIM43BA6NCK2 446 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 NRP1O14786 923 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 HOXB6P17509 224 aaKnown RBP14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 DNAJB13P59910 316 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 PITX1P78337 314 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 STARD3Q14849 445 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 CXCL17Q6UXB2 119 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 DENND1CQ8IV53 801 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 FEM1AQ9BSK4 669 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 SLC27A5Q9Y2P5 690 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 COL18A1P39060 1754 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 ADAMTSL3P82987 1691 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 CELF2O95319 508 aaKnown RBP14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 SLC35E2BP0CK96 405 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 AKR1A1P14550 325 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 STT3AP46977 705 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 ERVK-8P63133 956 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 MS4A2Q01362 244 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 SULT2A1Q06520 285 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 RABL3Q5HYI8 236 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 CEP78Q5JTW2 689 aa14.9□□□□□ -0.02
ARHGEF40-207ENST00000556399 DGKKQ5KSL6 1271 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms